Pseudorhodobacter turbinis: EOK75_17490
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Entry
EOK75_17490 CDS
T05954
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pseb
Pseudorhodobacter turbinis
Pathway
pseb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pseb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EOK75_17490 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pseb03019
]
EOK75_17490 (recQ)
03400 DNA repair and recombination proteins [BR:
pseb03400
]
EOK75_17490 (recQ)
Enzymes [BR:
pseb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EOK75_17490 (recQ)
Messenger RNA biogenesis [BR:
pseb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EOK75_17490 (recQ)
DNA repair and recombination proteins [BR:
pseb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EOK75_17490 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QCO57504
UniProt:
A0A4V1E1B0
LinkDB
All DBs
Position
unnamed1:complement(1044232..1046277)
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AA seq
681 aa
AA seq
DB search
MSDPSDLLSSVFGFSEFRPGQAEIVSAVLAGENTLAIMPTGGGKSLCFQLPAMCREGVTV
VISPLIALMRDQVRALKAAGVEAGALTSGNTDEETEEVFRALDEGRLKLLYLAPERLASG
ASLQMLRRIGVSAIAVDEAHCVSQWGHDFRPDYLRIGELRRTLNVPLAAFTATADEETRT
EIISRLFDGEAPSTFLRGFDRPNIHLAFAVKDNPRKQILAFAAARKGQSGIVYCGTRAKT
ETLAQALGEAGHLATSYHGGMDAEDRRTTEARFQREDGLIVVATVAFGMGIDKPDIRWVA
HADLPKSIEGYYQEIGRAGRDSAPAETLTLYGPDDIRLRRSQIDEGLAPVERKDADHARL
NALLGLAEATGCRRQVLLGYFGETSTACKNCDICDRPALVFDATEAVRKALSAILRTGES
FGAGHLIDILTGNSTEKVRQRGHDQLPTFAVGKELSKPAWGAVFRQMMGRDLVRPDTERY
GALRMTDAARPILRGEESITLRKDTIQSATSRPVVKTMVSDEDAPLLSALKAKRRALAEA
ARVPAYVIFPDRTLIEMAETRPETLDDMARINGIGAKKLESYGSSFLAVVTGAQAEQLHP
QRMRLAGRDAGEVFDRLAQVHLDLQRGPDGIDKPLSCTQTTLRHIAERRPATLAELDRIP
GMGGPKTERFGAAFLTVVAGD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacccttctgatcttctctcctctgtcttcgggttttccgaattccggcccggt
caggccgagattgtaagcgccgttctggctggcgaaaacacgcttgcgatcatgccgacg
gggggcgggaaatccctgtgcttccagctgcccgcgatgtgtcgcgaaggggtaacggtt
gttatctcgcctttgatcgcccttatgcgcgatcaggtgcgtgcgctgaaggcggcaggg
gttgaggcgggcgcgctgacctctggcaacacggatgaggaaaccgaggaggttttccgc
gcgctggatgaaggtcgcttgaagctgctgtacctcgcgccggaacgtcttgcctcgggg
gcgtcgctgcaaatgttgcgccggattggcgtttccgcgatcgcggtggatgaggcgcat
tgcgtcagccaatggggccatgacttccggcctgattatctgcggatcggggagttgcgc
cgcacgctgaacgtgccgcttgccgccttcaccgccaccgcggatgaggaaacccgcacc
gagatcatctcgcggctgtttgatggagaggctccctcgacctttctgcgcggctttgac
cggcccaatatccatctggcttttgcggtcaaagacaatccgcgcaagcagattctggcc
tttgccgccgcgcgtaaagggcagtcgggcattgtctattgtggtacccgcgccaaaacc
gaaacgctggcccaagcgctgggcgaggcggggcatttggccacctcttatcacggcggc
atggatgccgaggatcgccgcaccaccgaggcccgtttccaacgcgaggacgggttgatc
gtggtggcgacggtggcctttgggatggggatcgacaagcccgatatccgctgggtcgcc
catgccgatttacccaaatccattgagggttattatcaggaaatcggccgcgccggtcgt
gacagcgcccctgccgagacgctgacgctttacggtcccgatgatatccgcctgcgccgc
tcgcagattgacgaagggcttgccccggttgaacgcaaggatgccgatcatgcccgcctg
aatgcgcttttgggcttggccgaggcgacgggctgtcgccgccaagtgttgcttggatac
tttggcgaaacctcaaccgcttgtaaaaactgtgatatttgcgaccggcccgccttggtg
tttgatgcgaccgaggctgtgcgcaaggcgctttcggcgattctgcgcacgggggaatcc
tttggcgcggggcatctgattgatatactgaccggcaattccaccgaaaaggtgcgacag
cgtggccatgaccaattgccaacctttgccgtgggcaaggagctgtccaagcctgcatgg
ggtgctgtattccgtcagatgatggggcgtgatctggtgcgccccgataccgaacgttac
ggcgcgctgcgcatgaccgatgccgcccgccccattctgcgcggtgaggaaagcatcacc
ctgcgcaaggatacgatccagtcggcgacctcgcgccctgtggtcaagacgatggtctcg
gacgaagatgcgcccctgctttccgccctcaaggccaagcgccgcgccttggccgaggcg
gcgcgcgtgccggcctatgtgatctttcccgaccggaccctgatcgagatggccgaaacc
cgccccgaaacccttgacgatatggcgcgcatcaatggcatcggcgcgaagaagctggaa
agctatggctcatcttttctggcggtggttacgggcgcgcaggccgaacagcttcacccg
caacggatgcgccttgcggggcgtgacgcgggcgaggtttttgaccggctggcacaggtg
catctggatttgcagcgcgggccagatggcatcgacaaaccgctttcctgtacccaaacc
accctgcgccatatcgccgaaagacgccccgccacattggccgagctggaccgtatcccc
ggcatgggcgggccaaagaccgaacgtttcggcgctgcatttctaaccgttgttgcgggg
gactga
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