KEGG   Pseudorhodobacter turbinis: EOK75_18105
Entry
EOK75_18105       CDS       T05954                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
pseb  Pseudorhodobacter turbinis
Pathway
pseb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pseb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EOK75_18105 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pseb03400]
    EOK75_18105 (uvrB)
DNA repair and recombination proteins [BR:pseb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EOK75_18105 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EOK75_18105 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD UB2H AAA_30 AAA_22 AAA Kinesin DUF87
Other DBs
NCBI-ProteinID: QCO57615
UniProt: A0A4P8ELD1
LinkDB
Position
unnamed1:1177981..1180158
AA seq 725 aa
MPHNNMNAPAIRPEVLTRPKLEGGRRFKLSTPFEPAGDQPTAIKELAGGIMGGERDQVLL
GATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQP
EAYVARSDTFIEKESQINEQIDRMRHSATRALLERDDVIIIASVSCIYGIGSVETYSAMT
QDLVTGQSYDQRQMIAELVAQQYRRNDQAFQRGCFRVRGDSLEVWPAHLEDRAWRFSFFG
EELEAIIEFDPLTGAKTDNFQQIRIYANSHYVTPRPTMNQAVIGIKKELRMRLDQLTAEG
KLLEAQRLEQRCSFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIVFAD
ESHVSVPQIGGMYKGDFRRKMTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSIFVSATPSK
WELEQAGGVFTEQVIRPTGLVDPMVEIRPVEAQVDDLLDEIRRVALAGLRVLVTVLTKRM
AEDLTEYFHEQGIRIRYMHSDIDTIERIEIIRDLRLGAFDVLVGINLLREGLDIPECGLV
AILDADKEGFLRSETSLIQTIGRAARNSEGRVIMYADRITGSMERAMGETDRRRAKQIAY
NELHGITPTTVKKNVEDILAGLWKGDTDQSRVTAKVEPMLGSNLSAHLDALRVQMRKAAE
NLEFEEAARLRDEVKRLETVELAIADDPLARQSVVEGAVEDAQKMAGRSTAGRGGMRGGK
PRRGR
NT seq 2178 nt   +upstreamnt  +downstreamnt
atgccccataacaatatgaacgcccccgcaatacggccagaggtcctgacccgccccaag
ctggaaggcgggcggaggtttaaactttcgacgccgtttgaacccgcaggcgaccagccc
accgcgatcaaagagctggcgggcggcatcatggggggcgagcgcgatcaggtcttgctg
ggcgccaccggcaccggcaaaaccttcaccatggccaaggtgatcgaggaaacgcagcgc
cccgccatcatccttgcgcccaataaaacgctggccgcccagctttacggcgaattcaaa
gggttttttcccgataacgccgtcgaatatttcgtcagctattatgactattaccaaccc
gaggcctatgtcgcgcgctccgataccttcatcgaaaaggaatcgcagatcaacgagcag
atcgaccggatgcgccactcggccacgcgggcattgctggaacgtgacgatgtgatcatc
atcgcttcggtgtcttgcatctatggtatcggctcggttgagacctattccgcgatgacc
caagaccttgtaaccggccaaagttatgaccaacggcagatgatcgcggagctggtcgcc
cagcaataccgccgcaacgatcaggcgtttcagcgcggttgctttcgggtgcgtggcgat
tccctagaggtctggcccgcccaccttgaggatcgcgcctggcggttttcctttttcggt
gaggagctggaggcgattatcgaatttgacccgctgacgggggcaaagaccgacaatttt
caacaaatccgtatctatgcgaattcgcattatgtcaccccgcgcccgacgatgaaccaa
gccgttattggcatcaaaaaagagctgcggatgcggctggaccagctgaccgccgagggc
aagcttttggaggcgcagcggttggagcaacgctgttcctttgatctggagatgctggag
gcaactggcgtttgcaacgggattgagaactattcccgctatttgacgggtcgcgcaccg
ggcgagccaccgccgacgttgtttgaatttatccccgataatgccattgtgtttgccgac
gaatcccatgtttccgtgccgcagatcgggggcatgtataagggtgactttcggcgcaag
atgacgctggccgaacacgggtttcgcttgccgtcctgcatggacaaccgtcccctgaag
tttgaggaatgggatgcgatgcgcccgcagtcgatcttcgtttcggccaccccttcaaaa
tgggagctggagcaagccggcggtgtgttcactgaacaggtcatccgccccaccggcttg
gttgatcccatggtcgaaatccgcccggttgaggcacaagttgatgacctgctggatgaa
atccgccgtgtggcactggctggcttacgggtcttggtcacggtgttgaccaagcgcatg
gccgaggatttgaccgagtatttccacgagcagggcatccgcatccgctacatgcactcg
gacattgatacgattgaacgtattgaaatcattcgggatttgcggcttggggcgtttgat
gtgcttgtcgggatcaaccttttgcgtgaggggttggatattcctgaatgcggcttggtt
gcaattctggatgccgataaggaagggttcctgcgctctgagacctcattgatccagacc
attggccgtgcggcgcggaactcggaagggcgggtgattatgtatgccgatcgtatcacc
ggatcaatggaacgtgcgatgggcgaaaccgatcgtcgtcgtgccaaacagatcgcctat
aatgagctgcacggcatcacaccgacgaccgtcaagaagaatgtcgaggatattctggcg
gggctgtggaaaggcgataccgatcagtcacgcgttaccgccaaggtcgaacccatgctt
ggcagcaacctgtcggcgcatctggatgcattgcgggtgcaaatgcgtaaagccgccgag
aacctcgaatttgaagaggccgcccgtctgcgcgatgaggtcaagcgtctggaaaccgtg
gagctggccatcgcggatgacccgcttgcgcggcaatcggtggtagagggtgctgtggag
gatgcgcagaaaatggcggggcgttctactgccggtcggggcggaatgcgtgggggcaag
ccgcgtcgggggcgctaa

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