Pseudomonas sp. CCOS 191: CCOS191_0002
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Entry
CCOS191_0002 CDS
T03967
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
psec
Pseudomonas sp. CCOS 191
Pathway
psec03030
DNA replication
psec03430
Mismatch repair
psec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCOS191_0002 (dnaN)
03430 Mismatch repair
CCOS191_0002 (dnaN)
03440 Homologous recombination
CCOS191_0002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psec03032
]
CCOS191_0002 (dnaN)
03400 DNA repair and recombination proteins [BR:
psec03400
]
CCOS191_0002 (dnaN)
Enzymes [BR:
psec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCOS191_0002 (dnaN)
DNA replication proteins [BR:
psec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCOS191_0002 (dnaN)
DNA repair and recombination proteins [BR:
psec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCOS191_0002 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
TruB_C
Motif
Other DBs
NCBI-ProteinID:
CRI54538
LinkDB
All DBs
Position
I:2131..3234
Genome browser
AA seq
367 aa
AA seq
DB search
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVQGQQLSLTGTDLEVELVGRVQLE
EPAEPGEITVPARKLMDICKSLPSDVLIDIKVDEQKLLVKAGRSRFTLSTLPANDFPTVE
EGPGSLTCQLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSPGTLRAVATDGHRLALC
AMQAPIDQADRHQVIVPRKGILELARLLTDPEGMVSIVLGQHHIRATTGEFTFTSKLVDG
KFPDYERVLPKGGDKLVIGDRQALREAFSRTAILSNEKYRGIRLQLAAGQLKIQANNPEQ
EEAEEEISVDYSGSSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALLQEAGNDDSSY
VVMPMRL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcaccattcaacgcgaagccctgttgaaacccctgcaactggtcgcaggcgtc
gtcgagcgccgccagaccttgccggttctgtccaacgtcctgctggtcgtgcaaggccag
cagctgtcgttgaccggtaccgacctggaagtcgaactggttggccgcgtacagctggaa
gaaccggctgaaccgggcgagatcaccgtcccggcgcgcaagctgatggacatctgcaag
agcctgcccagcgatgtgctgatcgacatcaaggtcgacgagcagaagttgctggtcaag
gccggccgcagccgtttcaccctttccactttgccggccaatgacttcccgaccgtggaa
gaaggcccaggctcgctgacttgccagcttgagcagagcaaactgcgccgcctgatcgag
cgcaccagcttcgccatggcccaacaggacgtgcgctactacctcaacggcatgctgctg
gaagtatcccccggcaccctgcgtgccgtggccaccgatggccatcgcctggcactgtgc
gccatgcaggcaccgatcgaccaagctgatcgtcatcaggtcatcgtgccgcgcaaaggt
atcctggagctggcgcgcctgctgacagacccggagggcatggtcagcatcgttctgggc
cagcatcacattcgtgccaccaccggtgaattcactttcacctccaagctggtggacggc
aagttcccggactacgagcgcgttctgcctaaaggtggcgacaagctggtaatcggcgac
cgtcaggcactgcgcgaagcgttcagccgcaccgcgatcctgtccaacgagaagtaccgc
ggcattcgcctgcaactggccgctggccagctgaagatccaggctaacaacccagaacag
gaagaggcggaagaagaaatcagcgtcgactacagcggcagctcgttggagatcggtttc
aacgtcagctacctgctggacgtgctgggtgtcatgactacggagcaggtgcgcctgatt
ctgtcggactccaacagcagcgccctgttgcaggaagccggcaatgacgactcgtcctac
gttgtcatgccgatgcgtctgtaa
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