Pseudomonas sp. CCOS 191: CCOS191_0271
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Entry
CCOS191_0271 CDS
T03967
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
psec
Pseudomonas sp. CCOS 191
Pathway
psec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCOS191_0271 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psec03019
]
CCOS191_0271 (rppH)
Messenger RNA biogenesis [BR:
psec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CCOS191_0271 (rppH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
CRI54807
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All DBs
Position
I:283817..284296
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AA seq
159 aa
AA seq
DB search
MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPDETPEDALYRELNEEVGL
ERQDVEILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLVSNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLTRD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacccggatggttttcgccccaatgtcgggatcattctcacgaatgatgccggg
caggtgctatgggctcggcggatcaaccaggatgcctggcagtttccacagggtggcatc
aaccctgatgaaacgccggaagatgccctgtaccgcgagctgaacgaagaagtaggcctg
gaacgccaggatgtggaaatacttgcctgcacccgtggctggttgcgttatcgtttaccc
cagcgcctggtgcgcacccacagccagccgctgtgcataggccagaaacagaagtggttc
ctgctgcgcctggtgagcaatgagcaacgggtgcgcatggacctgaccggcaagccggaa
ttcgatggctggcgctgggtcagctactggtatccgctgggccaggtggtgacattcaag
cgcgaggtgtaccgccgcgccctgaaagagctagccccgcgcctgctgacgcgcgactga
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