Pseudomonas sp. CCOS 191: CCOS191_0537
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Entry
CCOS191_0537 CDS
T03967
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
psec
Pseudomonas sp. CCOS 191
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psec03009
]
CCOS191_0537 (dbpA)
Enzymes [BR:
psec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CCOS191_0537 (dbpA)
Ribosome biogenesis [BR:
psec03009
]
Prokaryotic type
rRNA helicases
CCOS191_0537 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
P-loop_SecA
CMS1
SBP_bac_3
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CRI55073
UniProt:
A0A0F7Y060
LinkDB
All DBs
Position
I:complement(569137..570522)
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AA seq
461 aa
AA seq
DB search
MTVETTAFATLPLSAAMLANLDALGYASMTPIQAQSLPVILKGQDLIAQAKTGSGKTAAF
GIGLLNPINPRYFGCQALVLCPTRELADQVAKELRRLARAEDNIKILTLCGGVSLGPQIA
SLEHGAHIIVGTPGRIQQHLDKGTLVLDGLNTLVLDEADRMLDMGFFDAIASIIGKTPSR
RQTLLFSATYPAGIEQLAKAFMRQPQQVKVEALHSDNQIEQRFIEIDAQQRLDAVTRVLG
HYRPQSCVAFCFTKQQCEDVVAHLTAKGIVAQALHGDLEQRDRDQVLTMFANRSSSVLVA
TDVAARGLDIDGLDMVINVELARDAEIHVHRVGRTGRAGEKGVAISLVAPAEGHRAQAIE
NLQKQPLRWEQLDSLKNKGGEPLLPAMTTLCIAAGRKDKLRPGDILGALTGDAGLPGKQV
GKIAIFDFVAFVAVERAVAKQAMQRLNSGKIKGRALKVRIV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgttgaaaccaccgcctttgccaccctcccgctgtccgccgccatgctggccaac
ctggacgccctgggctacgcctcgatgaccccgatccaggcccagagcctgccggtgatc
ctcaagggccaggacctgatcgcccaggccaagaccggcagcggcaagaccgccgccttc
ggcatcggcctgctcaacccgatcaacccgcgctacttcggttgccaggcgctggtgctg
tgcccgactcgcgagctggccgaccaggtggccaaggagctgcgccgcctggcccgcgcc
gaggacaacatcaagatcctcaccctgtgcggcggcgtctcgctgggcccgcagatcgcc
tcgctggagcacggcgcgcacatcatcgtcggcacccctgggcgcatccagcagcacctg
gacaagggcaccctggtgctcgacgggctgaacaccctggtcctcgacgaagccgaccgc
atgctcgacatgggcttcttcgacgccattgccagcatcatcggcaagaccccgtcacgc
cgccagaccctgctgttctcggccacctacccggccggcatcgagcagttggccaaggcc
ttcatgcgccagccgcagcaggtcaaggtcgaggcgctgcacagcgacaaccagatcgaa
cagcgcttcatcgagatcgacgctcagcagcgcctggacgctgtgacccgtgtactcggc
cactaccgccctcagtcctgcgtggcgttctgcttcaccaaacagcagtgcgaagacgtg
gtcgcccatctcacagccaagggcatcgtcgcccaggccctgcacggcgacctggagcag
cgcgaccgtgaccaggtgctgaccatgttcgccaaccgcagcagctcggtgctggtagcc
accgacgtcgccgcccgcggcctggacatcgatggcctggacatggtcatcaacgtcgaa
ctggcgcgtgatgccgagatccacgtgcaccgcgttggccgtaccggtcgtgcaggcgag
aaaggcgtggcgatcagcctggtggcgccggccgagggccatcgcgcccaggccatcgaa
aacctgcagaagcagccactgcgctgggaacagctggacagcctgaagaacaaaggcggc
gagccgctgctaccggcgatgaccaccctgtgcatcgccgccgggcgcaaggacaagctg
cgcccaggcgatattctcggtgcgctgaccggtgacgccgggctgccgggcaagcaggtg
ggcaagattgccatcttcgacttcgtcgcgttcgtggccgtggagcgggcagtggccaaa
caggccatgcagcgcctgaacagcggcaagatcaaaggtcgcgcgctgaaagtccgtatc
gtctga
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