Pseudomonas sp. CCOS 191: CCOS191_0695
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Entry
CCOS191_0695 CDS
T03967
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psec
Pseudomonas sp. CCOS 191
Pathway
psec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCOS191_0695 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psec03019
]
CCOS191_0695 (pnp)
03016 Transfer RNA biogenesis [BR:
psec03016
]
CCOS191_0695 (pnp)
Enzymes [BR:
psec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CCOS191_0695 (pnp)
Messenger RNA biogenesis [BR:
psec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CCOS191_0695 (pnp)
Transfer RNA biogenesis [BR:
psec03016
]
Prokaryotic type
tRNA degradation factors
CCOS191_0695 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
TraK_C
KH_2
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
CRI55231
LinkDB
All DBs
Position
I:752821..754926
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AA seq
701 aa
AA seq
DB search
MNPVIKQFQFGQSTVTLETGRIARQATGAVLVTVDNDVTVLVTVVGAKHADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFEGPIGAARVAFHESTGYLLNPTYEQQAASSLDMVV
AGTESAVLMVESEAKELTEDQMLGAVLFAHDEFQAVIKAVKELAAEAAKPTWDWKPAVAN
TELFNAIRAEFGEAVSQGYTITVKADRYARLGELRDQAIAKFSGEEGQPSAGEVKDIFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQ
IIGESRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAADAAKQRILGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDVLKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagcaattccagttcggtcaatcgaccgttaccctcgaaacgggc
cgcattgcccgtcaggccaccggcgccgtgctggtcaccgtcgacaacgatgtcaccgtg
ctggtgaccgtggtcggtgccaagcatgccgatccgagcaagggcttcttcccgctgtcc
gtgcactaccaggaaaagacctacgccgctggcaagatcccaggtggtttcttcaagcgt
gaaggccgcccatccgaaaaagaaaccctgacttcgcgcctgatcgaccgcccgatccgc
ccgctgttccctgaaggtttcatgaacgaagtgcaggttgtctgcaccgtggtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatc
tcgggcattccgttcgaaggcccgatcggcgccgcccgcgttgccttccacgaaagcacc
ggctacctgctgaacccgacctacgagcagcaggccgcttcgagcctggacatggtcgtt
gccggtaccgagtcggccgtactgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgccgtgctgttcgcccacgacgaattccaggccgtgatcaaggctgtc
aaagagctggctgccgaagccgccaagccgacctgggactggaaacctgccgttgccaac
accgagctgttcaacgccatccgcgccgagttcggcgaagcggtgtcgcagggctacacc
atcaccgtcaaggccgaccgctacgcgcgcctgggcgagctgcgcgatcaggcgatcgcc
aagttctccggtgaagaaggccagccatcggctggtgaagtcaaagacatcttcggcgag
atcgaataccgcaccgttcgcgaaaacatcgtcaacggcaagccacgtatcgacggtcgc
gacaccaagaccgtgcgcccgctgaacatcgaagtcggcgttctgccgaagacccacggt
tcggccctgttcacccgtggcgaaacccaggccctggtcgtcgcgaccctgggtaccgcc
cgtgacgcccagctgctggacaccctcgaaggcgagaagaaagaccccttcatgctgcac
tacaacttcccgccgttctcggtaggtgagtgtggtcgcatgggcggtgctggccgtcgt
gaaatcggccacggccgtctggcccgtcgttcggtacaggccatgctgccggccgctgac
gtgttcccgtacaccatccgcgtggtatcggaaatcaccgagtcgaacggctccagctcc
atggcttcggtctgcggtgcctccctggcgctgatggacgcgggcgtgccgatgaaggcg
ccggttgccggtatcgccatgggcctggtcaaggaaggcgagaagttcgccgtactgacc
gacatcctgggtgacgaagaccacctcggcgacatggacttcaaggtagccggtaccgcc
aaaggcgtcaccgcgctgcagatggacatcaagatcaacggcatcaccgaagagatcatg
gaaatcgccctgggccaggccctggaagcgcgcctgaacatcctcggccagatgaaccag
atcatcggcgaatcgcgtaccgagctgtcggccaacgctccgaccatgatcgcgatgaag
atcgacaccgacaagatccgtgacgtcatcggcaaaggcggcgccaccattcgcgccatc
tgcgaagagaccaaggcttcgatcgacatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggaagccgcggacgctgccaagcagcgcatcctgggcatcaccgccgaagcc
gagatcggcaagatctacgtcggcaaggtcgagcgcatcgtcgacttcggtgccttcgtc
aacatcctgccgggcaaggacggcctggtgcacatctccatgctgagcgatgctcgtgtc
gagaaggtcaccgacgtgctgaaggaaggccaggaagtcgaagtactggtactggacgtg
gacaaccgcggccgtatcaagctgtcgatcaaggacgttgccgctgccaaggcatcgggc
gtctaa
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