Pseudomonas sp. CCOS 191: CCOS191_1131
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Entry
CCOS191_1131 CDS
T03967
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psec
Pseudomonas sp. CCOS 191
Pathway
psec03030
DNA replication
psec03430
Mismatch repair
psec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCOS191_1131 (dnaE)
03430 Mismatch repair
CCOS191_1131 (dnaE)
03440 Homologous recombination
CCOS191_1131 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psec03032
]
CCOS191_1131 (dnaE)
03400 DNA repair and recombination proteins [BR:
psec03400
]
CCOS191_1131 (dnaE)
Enzymes [BR:
psec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCOS191_1131 (dnaE)
DNA replication proteins [BR:
psec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCOS191_1131 (dnaE)
DNA repair and recombination proteins [BR:
psec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCOS191_1131 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
CRI55667
UniProt:
A0A0F7Y457
LinkDB
All DBs
Position
I:1254023..1257547
Genome browser
AA seq
1174 aa
AA seq
DB search
MSVSFVHLRVHSEFSLVDGLVRIKPLAKALAGMNMPAVAITDQSNMCSLVKFYKTAMGAG
IKPICGADLWLAGVDPEAPLSRICFLAMNPKGYRNLTELISRGWTDGQRNGLVIIQRDWI
APASEGLIALSAGKEGDIGMALMANRQDEAQVLLADWMSMFPERFYVEVQRTNRAGDEEY
VHAAVALADKLGAPLVATNDVRFVKQSDFDAHETRVCIGEGWTLDDPRRPRGYSDQQYLK
SAEEMAELFSDLPDAIANTVEIAKRCNITVQLGKYFLPDFPTPNGMGIDDYLRHVSHEGL
EERLAVLWPKETTPNYEEKRQVYLDRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNDVPV
GPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMDGRDRVIDYV
AEAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFLKSDEDGREIWDMALKLEGVTRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEIINREQAKKNLPDVNIDFIPLDDRKTYE
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHADYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCVANNIDADLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVVLVEEVRSMKLRLDAPDVNFSDFKFTVNNDGRIVYGLGAI
KGVGEGPVEAIVEARAQGGPFKDLFDFCERIDLKRVNKRTLDALIRSGALDRLGPHFHDE
IKAYQANIDINRATLLSALGEAVKAAEQAAHTADSGHVDLFGGMFDEADVDVYANHRKVR
ELTLKERLKGEKDTLGLYLTGHPIDEYETEIRRFARQRIVDLKPARDTQTIAGMIIALRV
MKNKKGDKMGFVTLDDRSGRIEASLFADAFMGAQALLQTDAMVVVEGEVSNDDFSGGLRL
RVKTVMTMEDARTKLAESLRLKVAHDALKGDRLNWLGELITRHRGGCPITLEYTGSDAKA
MLQFGDQWSIDPADGLIQALRDQFGRENVFLQYR
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtctccttcgttcaccttcgcgtgcactccgaattctccctggtcgatggcctg
gtgcggatcaagccgctggccaaggccctggccgggatgaacatgccggcggtggcgatc
accgaccagagcaacatgtgctcgctggtgaagttctacaagaccgccatgggcgccggc
atcaagccgatctgcggtgccgacctgtggctggccggggtcgatccggaagcgccgctg
tcgcgcatctgtttcctggccatgaaccccaagggttaccgcaatctcaccgagctgatc
tcgcgtggttggaccgatggccagcgcaatggcctggtgatcatccagcgcgactggatc
gccccggccagcgaagggctgattgccctctccgccggcaaggaaggcgacatcggcatg
gcgttgatggccaatcgtcaggacgaagcccaggtcctgctcgccgactggatgagcatg
ttccccgagcgcttctatgtcgaggtacagcgtaccaaccgcgccggtgacgaggagtac
gtgcacgctgccgtggccttggccgacaagctcggtgcgccgctggtggcaaccaacgac
gtgcgtttcgtcaagcagtcggacttcgatgcccacgagacccgcgtgtgcatcggcgag
ggctggaccctggacgacccgcgccgcccgcgtggctacagcgaccagcagtacctcaag
tccgccgaagagatggccgagctgttcagcgacttgccggacgccattgccaacaccgtg
gagatcgccaagcgctgcaatatcaccgtgcagttgggcaagtacttcctccccgacttc
ccgacgcccaacggcatgggcatcgacgactacctgcggcatgtctcccacgaaggcctg
gaggagcgcctggcggtgctgtggccgaaggagaccacgcccaattacgaagagaagcgc
caggtctacctggaccgcctgaagttcgagctggacatcatcatccagatgggcttcccc
ggttacttcctgatcgttatggacttcatcaagtgggcgaagaacaacgacgtgccggtc
ggcccgggccggggttcgggtgccggttcgttggtggcctacgtgctgaagatcaccgac
ctcgacccgttggcctacgacctgctgttcgagcgcttcctcaaccctgaacgtatttcc
atgcccgacttcgacgtcgacttctgcatggatggccgcgaccgggtgatcgactacgtg
gccgaggcctacgggcgcaacgcggtgagccagatcatcaccttcggcaccatggccgcc
aaggcggtggtgcgtgacgtggcgcgggtgcagggcaagtcctatggcctggccgaccgc
ctgtcgaagatgatcccgttcgaagtgggcatgaccctggagaaggcctacgagcaggaa
gagatcctgcgcgacttcctcaagagcgacgaggatggccgcgagatctgggacatggcc
ctcaagctcgaaggtgtgacccgcggtaccggcaagcacgccggtggcgtggtgatcgcg
ccgaccaagctcaccgacttctcgccaatcgcctgtgatgaagaaggcggcggcctggtg
acccagttcgacaaggacgacgtcgaggccgcgggcctggtgaagttcgacttcctcggc
ctgcgtaccctgaccatcatcaagtgggcgatggagatcatcaaccgcgagcaggccaag
aagaacctgcccgacgtcaacatcgacttcatcccgctggacgaccgcaagacctacgag
ctgctgcaaaaagccgagaccacggcggtgttccagctcgaatcccgtggcatgaaggag
ctgatcaagaagctcaagcccgactgcctggaagacctgatcgcactggtggcgctgttc
cgccccggcccgctgcagtcgggcatggtggacgacttcatcaaccgcaagcacggccgc
gccgagttggcctacccgcatgcggactaccagtacgaaggcctcaagcccgtgcttgca
ccgacctacggcatcatcctgtaccaggaacaggtgatgcagatcgcccaggtgatggcc
ggctataccctcggcggcgcggacatgctgcgccgggccatgggtaagaaaaagcccgag
gaaatggccaagcagcgtggcggtttcatcgaaggctgcgtggccaacaacatcgatgcg
gacctggccggtaacatcttcgacctggtagagaaattcgccggctacggcttcaacaaa
tcccactccgccgcctacggcctggtgtcttaccagaccgcctggctgaagacccactac
ccggcgccgttcatggccgcggtgctgtcggcggatatgcacaacaccgacaaggtggtg
gtgctggtcgaggaagtacgcagcatgaagctgcgcctcgacgcgccggacgtgaacttc
tccgacttcaagttcaccgtcaacaacgatggccgcatcgtctatggcctgggggcgatc
aagggcgtgggcgaaggcccggtggaggcgatcgtcgaggcgcgcgcgcagggtggtccg
ttcaaggacctgttcgacttctgtgagcgcatcgacctcaagcgtgtcaacaagcgtacc
ctcgatgcgttgatccgcagtggcgcgctggatcgtctcggcccgcacttccatgacgag
atcaaggcctaccaggccaacatcgacatcaaccgcgcgaccctgctgtcggcgctgggt
gaggccgtcaaggctgccgagcaggcggcccataccgccgacagtggccatgtcgacctg
ttcggcggcatgttcgacgaggcagatgtcgacgtctatgccaatcatcgcaaggtgcgc
gaactgacgctcaaggagcggctgaaaggcgaaaaggacaccctcggcctgtacctcacc
gggcatccgatcgatgagtacgagaccgagatccgccgtttcgcccgccagcgcattgtc
gacctgaagcccgcgcgggatacccagaccatcgccgggatgatcattgccctgcgcgtg
atgaagaacaagaagggtgacaagatgggcttcgtcaccctcgacgaccgttccgggcgc
atcgaggcctcgttgttcgccgatgccttcatgggcgcccaggccctgctgcagaccgac
gccatggtggtggtggaaggggaggtcagcaacgacgacttctccggtggcctgcgcctg
cgggtcaagacggtgatgaccatggaggatgcccgtaccaagctggccgaaagcctgcgc
ctgaaggtcgcccacgacgcgctcaagggtgaccgcctgaactggctgggcgagctgatc
acccgtcaccgtggtggctgcccgatcaccctggagtacaccggcagcgacgccaaggcc
atgctgcaattcggcgaccagtggtccatcgacccggctgacggcctgattcaggcactg
cgtgaccagttcggacgtgagaacgtcttcctgcaataccgttga
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integrated database retrieval system
