Pseudomonas sp. CCOS 191: CCOS191_1246
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Entry
CCOS191_1246 CDS
T03967
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
psec
Pseudomonas sp. CCOS 191
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psec03021
]
CCOS191_1246 (rapA)
Transcription machinery [BR:
psec03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CCOS191_1246 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
DUF6231
Motif
Other DBs
NCBI-ProteinID:
CRI55782
UniProt:
A0A0F7Y4H9
LinkDB
All DBs
Position
I:complement(1384257..1387103)
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AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTILAQDGRLLTVLYPATGDTRQYSLRNAPLTRVRFSPG
DLITHFEGWKLTVQEVEDIDGLMVYHGIDPQNQPRTLPETQLSNFIQFRLASDRLFAGQI
DPLSWFSLRYNTLQHTSKQMLSTLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFIESDA
SNPFEDAQLALVALEWLVEDEKAQDALFAAGWDLMVVDEAHHLVWHEEQASPEYSLVEQL
AQVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESEHYRPVAEAVQELLDE
GRLSPKAHATIQGFLGAEGEALLAAVSDGDSQASARLIRELLDRHGTGRVLFRNTRAAIQ
GFPERQLHPYPLANPEAYADLPSGERAELYPEVAFQAQGEAGDDERWWRFDPRVDWLIDT
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPASVFHEGMSILERDRAAAYFADEEFGA
QVLVCSEIGSEGRNFQFAHHLVMFDLPAHPDLLEQRIGRLDRIGQKHTIQLHIPYLQDSP
QERLFQWYHEGLNAFLNTCPTGNALQHQFGPRLLQQLAGGDDKGWTQLVGEARAERERLE
AELHTGRDRLLELNSGGAGEGQALVEAILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRGQALSREDMQFLTWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDTNGNDLGPRVAF
ETLNDQLESVPKASANKFIQAQRDVLAKRIAAGEAKVLPTHDERVAQARHRLTAEADEEL
ARLTALKAVNPSVRDSEIDALRKQREEGLAALEKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggatcagcgacagcgaggccgagctcggt
cttgggaccatcctggcgcaggatggccgcctgttgaccgtgctctacccggccacgggc
gacacccgccagtactcgctacgcaatgcgccgctgacccgcgtgcgtttctcgccaggc
gacctgatcacccatttcgaaggttggaagctgaccgtgcaggaggtcgaggacatcgac
ggcctgatggtctaccacggcatcgacccgcagaaccagccgcgcacgctgcccgagacg
cagctgtccaacttcatccagttccgcctggccagcgaccgcctgttcgccgggcagatc
gacccgctgtcgtggttctcgctgcgctacaacaccctgcagcacaccagcaaacagatg
ctctccacgctgtggggcctgggtggcgtgcgtgcccagcctattgcccaccagttgcac
atcgcccgtgaagtggccgaccgcatcgccccccgcgtactgctggccgacgaagtgggc
ctgggcaagaccatcgaggccggcctggtcatccaccgccagctgctgtccggtcgcgcc
agtcgcgtgctgatcctggtaccggaaaacctccagcaccagtggctggtggaaatgcgc
cggcgcttcaacctgcaggttgcgctgttcgacgccgagcgcttcatcgaaagcgatgcc
agcaacccgttcgaggatgcccagctggcgctggtcgcgctggagtggctggtcgaggac
gaaaaggcccaggacgcgctgttcgccgccggctgggacctgatggtggtcgacgaggcc
caccacctggtctggcacgaagagcaggccagccccgaatactcgctggtcgagcagttg
gcccaggtgattcccggcgtgctgctgctcaccgccacgcctgaacagctcggccaggac
agccacttcgcccgcctgcgcctgctcgaccccaaccgcttccacgacctggccgccttc
cgcgccgaaagcgagcactatcgcccggtggccgaagccgtacaggagctgctcgacgaa
ggccgtctgtcgccgaaagcccacgccaccatccagggcttcctcggcgccgaaggcgaa
gcactgctggccgcggtcagcgatggcgacagccaggccagcgcgcgcctgatccgcgaa
ctgctcgaccgtcacggtaccggccgcgtgctgttccgcaacacccgtgcggcgatccag
ggcttccccgagcgccaactgcacccctacccgctggccaaccccgaggcctatgccgac
ctgccttcgggcgagcgcgccgagctgtacccggaagtggccttccaggcccagggcgaa
gccggcgacgacgagcgctggtggcgtttcgaccctcgggtcgactggctgatcgacacc
ctgaagatgctcaagcgcaccaaggtcctggtgatctgcgcccacgccgagaccgccatg
gacctggaagacgccctgcgcgtgcgctccggcatcccggcctcggtgttccatgaaggc
atgagcatcctcgagcgtgaccgcgccgccgcctacttcgccgacgaagagttcggcgcc
caggtgctggtgtgttccgagatcggcagcgaaggccgcaacttccagttcgcccatcac
ctggtgatgttcgacctgccggcccacccggacctgctcgagcaacgcatcggccgcctt
gaccggatcggccagaagcacacgatccaactgcacatcccgtacctgcaggacagcccg
caagagcgcctgttccagtggtaccacgaaggcctcaacgccttcctcaacacctgcccg
accggcaacgccctgcaacaccagttcggcccgcgcctgctgcaacagctggccggtggc
gacgacaaaggctggacccagctggtcggcgaggcccgtgccgaacgcgagcgcctggag
gccgagctgcacaccggtcgcgaccgcctgctggaactcaactccggtggcgccggcgaa
ggccaggcgctggtcgaggcaatcctcgagcaggacgaccagttcgccctgccgatctac
atggaaaccctgttcgacgccttcggtatcgacagcgaggaccactcggaaaacgccctg
atcctcaagccgagcgagaagatgctcgacgccagcttcccgctgggtgacgacgaaggc
gtgaccatcacctacgaccgtggccaggcgctgtcgcgcgaggacatgcagttcctcacc
tgggagcacccgatggtccagggtggcatggacctggtgctgtccggctcgatgggcaac
accgccgtggcgctgatcaagaacaaggcgctcaagcccggcaccgtgctgctcgagctg
ctctatgtcagcgaagtggtggcaccgcgcagcctgcagctggggcgctacctgccgccg
gccgcgctgcgctgcctgctcgacaccaacggcaacgacctgggcccgcgggtggccttc
gaaaccctcaacgaccagctcgaaagcgtgcccaaggccagcgccaacaagttcatccag
gcccagcgcgacgtgctggccaagcgcatcgccgcgggcgaggccaaggtcctgccaacc
cacgacgagcgcgtggcccaggctcggcatcgcctcaccgccgaagccgacgaggagctg
gcgcgcctgactgcgttgaaggccgtcaacccgagcgtgcgcgacagcgagattgacgcc
ctgcgcaagcagcgtgaagagggcctggcggcgctggaaaaagcggcactgcgcctcgag
gcgatccgggtgctcgtcgccggttga
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integrated database retrieval system
