Pseudomonas sp. CCOS 191: CCOS191_1419
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Entry
CCOS191_1419 CDS
T03967
Symbol
ydiJ
Name
(GenBank) putative protein YdiJ
KO
K26063
(R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
Organism
psec
Pseudomonas sp. CCOS 191
Pathway
psec00310
Lysine degradation
psec01100
Metabolic pathways
psec01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
CCOS191_1419 (ydiJ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Fer4_8
BBE
CCG
ORC6_2nd
Fer4_20
Motif
Other DBs
NCBI-ProteinID:
CRI55955
LinkDB
All DBs
Position
I:1582801..1585818
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AA seq
1005 aa
AA seq
DB search
MIAQLPPRAPAAQYPEFLDALKNSGFRGQISADYGTRTVLATDNSIYQRLPQAAVFPLDA
DDVARVAKLMAEPRFRDIKLTPRGGGTGTNGQSLTDGIVVDLSRHMNNILEINAEQRWVR
VQAGVVKDQLNAALKPHGLFFAPELSTSNRATVGGMINTDASGQGSCTYGKTRDHVLELH
SVLLGGERLHSLPIDDAALEQACAAPGRVGEVYRMAREIQETQGELIESTFPKLNRCLTG
YDLAHLRDDQGRFNLNSVLCGAEGSLGYVVEAKLNVLPIPKYAVLVNVRYTSFMDALRDA
NALMAHKPLSIETVDSKVLMLAMKDIVWHSVAEYFPADPERPTLGINLVEFCGDEPDEVN
ARVQAFVAHLQADKGVERLGHTLAEGAEAVTRVYVMRKRSVGLLGNVEGEVRPQPFVEDT
AVPPEQLADYIADFRALLDGYGLAYGMFGHVDAGVLHVRPALDMKDPAQAALVKPISDAV
AALTKSYGGLLWGEHGKGLRSEYVPEYFGELYPALQRLKGAFDPHNQLNPGKICTPPDSA
EGLTPVDGVTLRGDLDRGIDERVWQSFGSAVHCNGNGACYNYDPNDAMCPSWKATRERQH
SPKGRASLIREWLRLQGEANIDVLAAAQRKASWLKGLPARLRNSRAQQQGQHDFSHEVYD
AMAGCLACKSCAGQCPIKVNVPDFRSRFLELYHGRYQRPLRDYLIGSLEFTIPYLAHAPG
LYNAVMGSKWVSRLLADKVGMVDSPLISRFNFQATLTRCRVQVASVPALRELTPAQRERS
IVLVQDAFTRYFETPLLASFIELAHRLGHKVFLAPYSANGKPLHVQGFLGAFAKAAVRNA
TQLKALADCGVPLVGLDPAMTLVYRQEYQKVDGVECPSVLLPQEWLMNVLPEQAPFKADS
FRLMAHCTEKTNVPASTRQWEQVFARLGLKLVTEATGCCGMSGTYGHEARNQEASKTIFE
QSWATKLDKAGEALATGYSCRSQVKRMTEKQLRHPLEVVLQYAQR
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcccagctgccgccccgtgcgcccgccgcccaataccccgaattcctcgacgcc
ctgaagaacagcggcttccgtggccagatcagcgccgactacggcacccgcaccgtgctg
gccaccgacaactcgatctaccagcgcctgccccaggcggcggtgtttccgctggacgcc
gacgacgtggcgcgggtcgccaagctcatggccgagccgcgttttcgtgacatcaagctg
accccgcgtggcggcggtaccggcaccaacggccagtcgctgaccgacggcatcgtcgtc
gacctgtcgcggcatatgaacaacatccttgaaatcaacgccgagcaacgctgggtgcgg
gtgcaggcgggcgtggtcaaggaccagctgaatgccgcgctcaagccccacgggctgttc
ttcgcgccggagctgtccacctccaaccgcgccaccgtcggcggcatgatcaacaccgac
gccagtggccagggcagctgcacctacggcaagacccgcgaccacgtgctcgaattgcac
agcgtgctgctcggcggtgagcgcctgcacagcctgccgatcgacgatgcggcgctggag
caggcctgcgccgccccaggccgggtcggcgaggtgtaccgcatggcccgcgagatccag
gaaacccagggcgaactgatcgagagcaccttccccaagctcaaccgctgcttgaccggc
tacgacctggcgcacctgcgcgacgatcagggccgcttcaatctcaacagcgtgctgtgc
ggggccgagggttcgctgggctatgtggtcgaagccaagctcaatgtgctgccgatcccc
aagtacgccgtactggtcaacgtgcgctacaccagcttcatggacgccctgcgcgacgct
aacgcgctgatggcgcacaagccgttgtcgatcgagaccgtcgattccaaggtgctgatg
ctggcgatgaaggacatcgtctggcacagcgtcgccgaatacttcccggccgaccccgag
cgcccgaccctgggcatcaacctggtggagttctgcggtgacgaaccggacgaggtcaat
gcccgggtccaggccttcgtcgcgcacctccaggcggacaagggtgtcgagcgcctgggc
cacaccctggccgaaggcgccgaagcggtgacccgcgtctatgtgatgcgcaagcgctcg
gtggggctgctgggcaacgtcgagggcgaagtgcgcccgcagccgttcgtcgaggacacc
gcggtgccgccagagcagctggccgattacattgccgacttccgtgcattgctcgatggc
tatggcctggcctacggcatgttcggccatgtcgatgccggtgtgctgcacgtgcgcccg
gcgctggacatgaaagatccggcccaggccgcgctggtcaagccgatctccgatgccgtg
gcggcgctgaccaagagctatgggggcctgctgtggggcgagcacggcaagggcctgcgc
tcggagtatgtgccggagtacttcggcgagttgtacccggcgctgcagcgcctcaagggc
gcgttcgacccgcacaaccagctcaacccgggcaagatctgcaccccgccggacagcgcc
gaaggcctgaccccggtggatggcgtgaccctgcgcggcgacctcgaccgaggcatcgat
gagcgcgtgtggcagagcttcggcagcgccgtgcactgcaacggcaacggcgcctgctac
aactacgaccccaacgacgccatgtgcccgtcgtggaaggccacccgcgaacgccagcac
tcgcccaagggccgtgcctcgctgatccgtgagtggctgcgcctgcagggcgaggcgaac
atcgatgtgctcgccgccgcccagcgcaaggcctcctggctcaaggggttgccggcgcgg
ctgcgcaacagtcgtgcgcagcagcaggggcagcacgacttctcccacgaggtgtacgac
gccatggccggctgcctggcgtgcaagtcctgcgcggggcagtgcccgatcaaggtcaac
gtgccggacttccgctcacgcttcctcgagctgtaccacggccgctaccagcgtccgctg
cgcgactacctgatcggctcgctggagttcaccatcccgtacctggctcatgcgccgggc
ctgtacaacgcggtgatgggctcgaagtgggtgagcaggctgctggcggacaaggtcggc
atggtcgacagcccgctgatcagtcgtttcaacttccaggccaccctgacccgttgccgg
gttcaggtcgccagcgtgcccgcgctgcgtgagctgaccccggcccagcgcgagcgcagc
atcgtgctggtgcaggacgccttcacccgctatttcgagacgccactgctggcctcgttc
atcgaactggcccatcgcctggggcacaaggtgttcctcgcgccctacagcgccaacggc
aagccgctgcacgtgcagggtttcctcggtgccttcgccaaggcggcggtccgcaacgcc
acccagctcaaggccttggccgactgcggcgtgccgctggtggggttggacccggcgatg
accctggtctatcgccaggagtaccagaaggtcgatggcgtggagtgcccgtcggtattg
ctgccccaggagtggctgatgaacgtgctgcccgagcaggcgccgttcaaggccgacagc
ttccgcctgatggcccactgcaccgagaagaccaatgtgccggccagcaccaggcagtgg
gagcaggtattcgcccgcctggggctgaaactggtcaccgaggccaccggctgctgcggc
atgtctggtacctatgggcacgaggcgcgtaaccaggaggcctcgaagaccatcttcgag
cagtcctgggcgaccaagctggacaaggcaggggaggcactggcgaccgggtattcatgc
cgcagccaggtcaagcgcatgaccgagaagcagctgcgccacccgctggaagtggtgctg
cagtacgcccagcgctag
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