Pseudomonas sp. CCOS 191: CCOS191_1547
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Entry
CCOS191_1547 CDS
T03967
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
psec
Pseudomonas sp. CCOS 191
Pathway
psec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCOS191_1547 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psec03400
]
CCOS191_1547 (uvrB)
DNA repair and recombination proteins [BR:
psec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCOS191_1547 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CCOS191_1547 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
CRI56083
LinkDB
All DBs
Position
I:1734444..1736459
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRQMVEGIDAGLSHQTLLGVTGSGKTFSIANVIQQVQRPTM
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERRDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNEMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVENIAAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLVEAVDGIKEELKQRLEYLHASNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPDDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAVSPQTIFVSATPGPYEAEHAGRVVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEIGKRVALGERVLATTLTKRMAEDLTDYLADHDVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADNITGSMQRAIDETERRREKQVAFNQANGIVPKGVVKDITDILEGASV
PGARSKKRKGMAKAAEEAGRYEVELQTPAQITKRIKQLEEKMFQFARDLEFEAAAQLRDE
IGQLRERLLAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagttccagctcgtcacccgcttccagccggccggcgatcagcccgaggccatc
cgccagatggtcgagggcatcgacgccggcctttcgcaccagaccctgctcggggtgacc
ggctcgggcaagaccttcagtatcgccaacgtcatccagcaggtgcagcgcccgaccatg
gtgctggcgccgaacaagaccctggccgcgcagctgtacggcgagttcaaggcattcttc
ccgaacaacgccgtcgaatacttcgtttcctattacgattactaccagccggaagcctat
gtgccgtcgtcggacaccttcatcgagaaggacgcctcgatcaacgaccatatcgaacag
atgcgcctgtcggcgaccaaggcgctgctggagcggcgcgacgcgatcatcgtcaccacc
gtgtcgtgcatctacggcctgggcagccccgagacgtacctgaagatggtcctgcacgtc
gaccgtggcgacaagctcgaccagcgtgccctgctgcgccgcctggccgacctgcaatac
acccgcaacgagatggatttcgcccgcgccaccttccgcgtgcgcggcgacgtgatcgat
atcttcccggccgaatcggacctcgaggctatccgcatcgagctgttcgacgacgaagtg
gagaacatcgctgccttcgacccgctgaccggcgaggtcatccgcaagctgccgcgtttc
actttctaccccaagagtcactacgtaaccccacgggaaaccctggttgaggcagtggac
ggcatcaaggaagagctcaagcagcgcctcgagtacctgcacgcgagcaacaagctggtc
gaggcgcagcgcctggagcagcgcacccgtttcgacctggagatgatcctcgaactgggc
tactgcaacggcatcgagaactactcgcgctacctctccggccgcccggccggcgcgccg
ccgcccacgctctacgactacctgccggatgacgcgctgctggtgatcgacgaatcccac
gtcagcgttccgcaggtcggcgccatgtacaagggcgaccgttcgcgcaaggaaaccctg
gtggagtacggcttccgcctgccgtcggcactggacaaccggcccatgcgcttcgatgaa
tgggaggcggtcagcccgcagaccatcttcgtctcggctacccccggcccctacgaggcc
gagcacgccgggcgggtggtggagcaggtggtgcggccgaccggcctggtcgatccgcag
gtcgaggtgcgcccggcgctgacccaggtcgacgacctgctctcggagatcggcaagcgc
gtcgccctgggcgagcgggtgctggccaccacgctgaccaagcgcatggccgaggacctc
accgactacctggccgaccacgatgtgcgggtgcgctacctgcactcggacatcgacacc
gtcgagcgcgtggagatcatccgcgacctgcgcctgggtaccttcgacgtgctggtgggg
atcaacctgctgcgcgagggcctggacatgcccgaggtgtcgctggtggcgatcctcgac
gccgacaaggaaggcttcctgcgctcggagcgttcgctgatccagaccatcggccgcgcc
gcgcgtaacctcaacggcagggcgattctctacgccgacaacatcaccggctccatgcag
cgcgccatcgacgagaccgagcggcgccgcgagaagcaggtcgccttcaaccaggccaac
ggcatcgtgcccaagggcgtggtcaaggacatcaccgacatcctcgaaggtgccagcgtg
cctggagcccgcagcaagaagcgcaagggcatggccaaggcggcggaggaggccgggcgc
tacgaggtcgagctgcagaccccggcgcagatcaccaagcgcatcaagcagctggaagag
aagatgttccagttcgcccgcgacctggagttcgaggcggcggcgcaattgcgcgacgag
atcggacagttgcgcgaacgcttgctggccagttga
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integrated database retrieval system
