Pseudomonas sp. CCOS 191: CCOS191_1688
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Entry
CCOS191_1688 CDS
T03967
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psec
Pseudomonas sp. CCOS 191
Pathway
psec03030
DNA replication
psec03430
Mismatch repair
psec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCOS191_1688 (dnaQ)
03430 Mismatch repair
CCOS191_1688 (dnaQ)
03440 Homologous recombination
CCOS191_1688 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psec03032
]
CCOS191_1688 (dnaQ)
03400 DNA repair and recombination proteins [BR:
psec03400
]
CCOS191_1688 (dnaQ)
Enzymes [BR:
psec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCOS191_1688 (dnaQ)
DNA replication proteins [BR:
psec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCOS191_1688 (dnaQ)
DNA repair and recombination proteins [BR:
psec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCOS191_1688 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
DUF6782
Motif
Other DBs
NCBI-ProteinID:
CRI56224
LinkDB
All DBs
Position
I:1899842..1900597
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AA seq
251 aa
AA seq
DB search
MEQQQDKRFVILDTETTGMPVAEGHRIIEIGCVEVVGRRLTGRHFHVYLQPDRESDEGAI
NVHGITDAFLVGKPRFGDVAEEFFEFIQGATLVIHNAAFDVGFINNEFALIGQQDRADIS
QHCPILDTLMMARSRHPGQRNSLDALCKRYGIDNSGRELHGALLDSELLADVYLAMTGGQ
TSLSLAGEGAGDEDGQGATGSEIRRIVGRAPGRVILANEEELEAHAERLAAIAKSAGGPS
MWQALTEPAAS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtggagcagcagcaagacaaacggttcgtcatcctcgacaccgagaccaccggcatgccg
gtggccgaaggccaccgcatcatcgagatcggttgcgtcgaggtcgtgggccggcgcctg
accgggcggcacttccatgtctacctgcagcccgaccgcgagagtgacgagggcgcgatc
aacgtccacggcatcaccgatgccttcctggtcggcaaaccgcgctttggcgatgtggcc
gaggagttcttcgagttcatccagggcgctaccctggtcatccacaacgccgcgttcgac
gttggcttcatcaacaacgagttcgccctgatcggccagcaggatcgtgccgatatctcg
cagcattgcccgatcctcgacaccctgatgatggcgcgctcgcgccacccggggcagcgc
aacagcctcgatgccctgtgcaaacgctatggcatcgacaattccggccgtgagctgcac
ggcgcactgctcgactcggaactgctggccgacgtctacctggcgatgaccggtggccag
accagcttgtcgctggcgggcgaaggggcgggcgacgaggatgggcaaggggcaaccggt
agcgagatccgccgtatcgtcgggcgtgcgccggggcgggtgatcctggccaatgaggaa
gagctcgaggcccatgccgagcgtttggcggccattgccaagtcggcgggtgggccgtcg
atgtggcaggcattgaccgagccagccgccagctga
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