KEGG   Pseudomonas sp. CCOS 191: CCOS191_2272
Entry
CCOS191_2272      CDS       T03967                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psec  Pseudomonas sp. CCOS 191
Pathway
psec02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psec00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CCOS191_2272
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psec03021]
    CCOS191_2272
Transcription machinery [BR:psec03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CCOS191_2272
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_20 Sigma70_ECF HTH_23 HTH_40 GerE HTH_Tnp_ISL3 DUF6820 HTH_24 HTH_10 HTH_Tnp_4
Other DBs
NCBI-ProteinID: CRI56808
LinkDB
Position
I:complement(2531776..2532276)
AA seq 166 aa
MSTLDRSALHQLYCENNGWLKSWLRARLGNAADASDLAHDTFLRVMTARNQGPIREARSY
LSAIARALLIDKVRRRAIEQAYLQALALRPEPVEVSPETRLSIIEMLVAVDALLDELGPR
TRDIFLAVQLEGLTYAAVAERFDVSITTVKNHLIRAMTRCLLVVDN
NT seq 501 nt   +upstreamnt  +downstreamnt
atgtcgacgctcgaccgctcggcgcttcaccagctgtactgcgaaaacaacggctggctg
aaaagctggctgcgcgcacgcctgggcaatgccgccgatgcgtccgacctggcccacgac
actttcctgcgggtgatgactgcccgcaaccaaggccccattcgcgaggcgcgcagctac
ctcagcgccattgcccgcgcgctgctgatcgacaaagtcaggcgccgcgccatcgagcag
gcctacctgcaggccctggccctgcgcccggagccggtcgaagtgtcgccggagacgcgc
ctgtcgatcatcgaaatgctggtagcggtcgatgcactgctcgacgaactgggccccagg
acccgtgacatcttcctcgcggtgcaactggaagggctgacctacgcggcggtcgccgaa
cgcttcgatgtatcgatcaccacagtcaagaaccatctgatccgggccatgacccgctgc
ctgctggtggtcgacaattga

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