Pseudomonas sp. CCOS 191: CCOS191_2272
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Entry
CCOS191_2272 CDS
T03967
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psec
Pseudomonas sp. CCOS 191
Pathway
psec02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CCOS191_2272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psec03021
]
CCOS191_2272
Transcription machinery [BR:
psec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CCOS191_2272
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_20
Sigma70_ECF
HTH_23
HTH_40
GerE
HTH_Tnp_ISL3
DUF6820
HTH_24
HTH_10
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
CRI56808
LinkDB
All DBs
Position
I:complement(2531776..2532276)
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AA seq
166 aa
AA seq
DB search
MSTLDRSALHQLYCENNGWLKSWLRARLGNAADASDLAHDTFLRVMTARNQGPIREARSY
LSAIARALLIDKVRRRAIEQAYLQALALRPEPVEVSPETRLSIIEMLVAVDALLDELGPR
TRDIFLAVQLEGLTYAAVAERFDVSITTVKNHLIRAMTRCLLVVDN
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgctcgaccgctcggcgcttcaccagctgtactgcgaaaacaacggctggctg
aaaagctggctgcgcgcacgcctgggcaatgccgccgatgcgtccgacctggcccacgac
actttcctgcgggtgatgactgcccgcaaccaaggccccattcgcgaggcgcgcagctac
ctcagcgccattgcccgcgcgctgctgatcgacaaagtcaggcgccgcgccatcgagcag
gcctacctgcaggccctggccctgcgcccggagccggtcgaagtgtcgccggagacgcgc
ctgtcgatcatcgaaatgctggtagcggtcgatgcactgctcgacgaactgggccccagg
acccgtgacatcttcctcgcggtgcaactggaagggctgacctacgcggcggtcgccgaa
cgcttcgatgtatcgatcaccacagtcaagaaccatctgatccgggccatgacccgctgc
ctgctggtggtcgacaattga
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integrated database retrieval system