Pseudomonas sp. CCOS 191: CCOS191_3865
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Entry
CCOS191_3865 CDS
T03967
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
psec
Pseudomonas sp. CCOS 191
Pathway
psec00521
Streptomycin biosynthesis
psec00523
Polyketide sugar unit biosynthesis
psec00525
Acarbose and validamycin biosynthesis
psec00541
Biosynthesis of various nucleotide sugars
psec01100
Metabolic pathways
psec01110
Biosynthesis of secondary metabolites
psec01250
Biosynthesis of nucleotide sugars
Module
psec_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CCOS191_3865 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CCOS191_3865 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CCOS191_3865 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CCOS191_3865 (rfbB)
00525 Acarbose and validamycin biosynthesis
CCOS191_3865 (rfbB)
Enzymes [BR:
psec01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CCOS191_3865 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
CRI58401
UniProt:
A0A0F7Y265
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Position
I:complement(4379922..4380998)
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AA seq
358 aa
AA seq
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MKILVTGGAGFIGSAVVRHIITNTSDSVVNVDKLTYAGNLESLRDVDQNPRYAFEHVDIC
NREALDRVFQEHQPDAVMHLAAESHVDRSISGPSEFIQTNIIGTYALLEAARGYWSGLDE
GRKSAFRFHHISTDEVYGDLEGPEDLFTETTPYQPSSPYSASKASSDHLVRAWARTYGLP
TLVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLFVEDHARALYKVVT
EGEVGETYNIGGHNEKQNIEVVQAVCALLDELRPASTFVPHFNLVKYVTDRPGHDLRYAI
DASKIQRELGWSPEETFESGIRKTVQWYLDNAEWVAHIKNGSYQQWIDKNYASRAGEQ
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
gtgaagattttagtaacaggcggtgcgggctttattggttcggctgtcgttcggcacatc
attaccaatacaagcgactccgtggtcaacgtcgacaagctcacctatgctggcaatctt
gaatcattgcgggacgtcgaccagaacccacgctatgccttcgaacacgtcgacatctgc
aatcgcgaagcgctggaccgagtattccaggaacaccagcctgacgcagtgatgcacctg
gctgccgaatctcacgtcgatcgttcgatcagcggcccatcggagttcatccagaccaat
atcatcggtacttatgccttgctggaagctgcacgtggctattggtcggggttggatgag
gggcgtaaatctgcatttcgtttccaccatatttcgaccgacgaagtttatggtgacttg
gaggggccggaagatctcttcaccgagacaactccttatcagccaagctccccatactct
gcgagcaaggccagctctgaccacttggtgcgtgcctgggcacgtacgtacgggctgccg
acactggttaccaactgttcaaacaactatggcccatatcacttccctgagaaactgatc
ccgctggtcattctcaatgcactggaaggaaaaccgctgccaatttatggtaaaggtgat
caaattcgtgattggctgtttgtcgaagaccacgcgcgtgcgctgtacaaggtcgtaacc
gaaggtgaggttggagaaacctataatatcggtggtcacaacgaaaagcagaatatcgaa
gttgttcaagcggtttgcgcgcttctggatgaactacgtcctgcctctacatttgttccg
cacttcaatctcgttaagtatgtcactgatcgtccaggccatgacctgcgttacgcgata
gatgcaagcaagatccagcgcgaactggggtggagcccagaggaaacctttgaatcaggt
attcgcaagaccgtgcagtggtatctcgacaacgcggaatgggtggctcacattaagaat
ggcagctatcagcagtggatcgataaaaattacgcatcgcgtgctggtgaacaatga
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