Pseudomonas sp. CCOS 191: CCOS191_4192
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Entry
CCOS191_4192 CDS
T03967
Symbol
ydcS
Name
(GenBank) putative ABC transporter periplasmic-binding protein YdcS
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
psec
Pseudomonas sp. CCOS 191
Pathway
psec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CCOS191_4192 (ydcS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psec02000
]
CCOS191_4192 (ydcS)
Transporters [BR:
psec02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CCOS191_4192 (ydcS)
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GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
CRI58728
UniProt:
A0A0F7YAH8
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All DBs
Position
I:4730628..4731767
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AA seq
379 aa
AA seq
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MSVHKTLLLGALLATAGAQAAGLPQQLGAGEGQLDIVAWPGYIERGESDKAYDWVTGFEN
ETGCKVSVKTAATSDEMVSLMTKGGYDLVTASGDASLRLIAGKRVQPINTALIPNWKNLD
PRLRNGAWYVVKDQVYGTPYQWGPNVLLYNTDVFKQPPSSWSVVFEPQDLPDGKPNKGRV
QAYDGPIYIADAALYLKAAKPELGIQNPYELNEAQYKAVLDLLRQQQPLIHRYWHDATVQ
MSDVKNEGVVATSSWGYMVNGLKADKQPVASVVPKEGATGWADTTMLHSEAKHPNCAYKW
MDWSLQPKVQGDVAAWFGSLPAVPAACTGNALLGDEGCKTNGFDNFDKIAFWKTPQAEGG
KFVPYSRWTQDYIAIMGGR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgcacaagacccttctgctcggtgccctgctggccactgccggcgcccaggcc
gccgggctgccccagcagctcggtgccggtgaaggccagctggatatcgtcgcctggccc
ggctatatcgaacgcggtgaaagcgacaaggcctatgactgggtcaccggcttcgagaat
gagactggctgcaaggtcagcgtcaagacggccgccacctccgacgaaatggtcagcctg
atgaccaagggtggctatgacctggtaacggcctcgggtgatgcctcgctgcggctgatc
gccggcaagcgtgtgcagccgatcaacaccgcgttgatccccaactggaaaaacctcgac
ccgcgcctgcgcaacggcgcctggtacgtggtcaaggaccaggtctacggcacaccctac
cagtgggggccgaacgtgctgctgtacaacaccgacgtgttcaagcagccgccgagcagc
tggagcgtggtgttcgagccgcaggacctgccggacggcaagcctaacaagggccgcgtg
caggcgtacgatgggccgatctacatcgccgacgcggcgctctacctcaaggccgccaag
cccgaactgggcatccagaacccttatgaactgaacgaggcgcagtacaaggcggtgctc
gacctcctgcgccagcaacagccgttgatccaccgctactggcacgacgcgaccgtacag
atgagcgacgtgaagaacgaaggcgtggtggccaccagctcctggggctacatggtcaac
ggcctgaaggccgacaagcagccggtggcctcggtggtaccgaaggaaggcgccaccggc
tgggccgacaccaccatgctgcacagcgaggccaagcaccccaattgcgcctacaagtgg
atggactggtcgctgcaacccaaggtgcaaggcgatgtggcggcctggttcggctcgttg
ccggcggtgcccgcggcctgcaccggcaacgcgctgctgggtgacgagggctgcaagacc
aacggcttcgacaacttcgacaagatcgccttctggaagaccccgcaggccgagggcggc
aagttcgtgccgtacagccgctggacccaggactacatcgcgatcatgggcgggcggtaa
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