Pseudomonas sp. CCOS 191: CCOS191_4434
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Entry
CCOS191_4434 CDS
T03967
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
psec
Pseudomonas sp. CCOS 191
Pathway
psec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCOS191_4434 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psec03019
]
CCOS191_4434 (rhlB)
Enzymes [BR:
psec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CCOS191_4434 (rhlB)
Messenger RNA biogenesis [BR:
psec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CCOS191_4434 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
CRI58970
UniProt:
A0A0F7Y3J9
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All DBs
Position
I:5000050..5001522
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AA seq
490 aa
AA seq
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MLKALKKIFAKGDAAPPIAASQPEPAPQPAAAQAPECQAGKPRPKPAPKAKAEPQAAVQV
AQPPRAESPAKDKPRRERKPKPQASLWKPEDFVVEPQEGKTRFHDFKLSNELMHAIHDLG
FPYCTPIQAQVLGYTLRGQDAIGRAQTGTGKTAAFLISIISQLQQTPPPKERYMGEPRAL
IIAPTRELVVQIAKDAQALTKYTGLNVMSFVGGMDFDKQLKSLEARHCDILVATPGRLLD
FNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMN
LAKQWTTNPAIVEIEPENVASETVEQHVYAVAGSDKYKLLYNLVTQNKWERVMVFANRKD
EVRRIEEKLVRDGINAAQLSGDVPQHKRIRTLESFREGRITVLVATDVAGRGIHIDGISH
VINFTLPEDPDDYVHRIGRTGRAGTSGVSISFAGEDDSYQLPAIEELLGRKIKCEMPPDE
LLKPVPRKHH
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaggcactcaagaaaatattcgccaaaggtgacgccgcaccgcccatcgccgcg
tcccaacccgagccggctcctcagccggccgccgcccaggcgccagagtgccaggccggc
aaacccaggccaaagcctgcgcccaaggccaaggccgagccacaagccgccgtccaggtc
gcccagccgccgcgcgccgagtcccccgccaaggacaaaccacgccgcgaacgcaagccc
aagccgcaggccagcctgtggaagccggaggacttcgtggtcgagccgcaggaaggcaag
acgcgtttccacgacttcaagctctccaatgagctgatgcatgccatccacgacctcggc
ttcccctattgcacgccgatccaggcccaggtcctgggttacaccctgcgcggccaggac
gccatcggtcgggcccagaccggcaccggcaagaccgccgcgttcctgatctcgatcatc
tcgcagctgcagcagaccccaccgcccaaagagcgctacatgggcgagccgcgggcgctg
atcatcgccccgacccgcgagctggtggtgcagatcgccaaggatgcccaggccctgacc
aagtacaccggcctgaatgtgatgagctttgtcggcggcatggacttcgacaagcagctc
aagtcactggaagcacgccattgcgacatcctggtggccaccccgggccgcctgctggac
ttcaaccagcgcggcgaggtgcacctggacatggtcgaggtgatggtactggacgaggcc
gaccgcatgctcgacatgggcttcatcccccaggtccgccagatcatccgccagaccccg
cccaagagcgaacgccagaccctgctgttctccgccaccttcaccgacgacgtgatgaac
ctggccaagcagtggaccaccaacccggccatcgtcgagatcgagccggagaacgtcgcc
agcgagaccgtcgaacagcacgtctacgccgtggccggcagcgacaagtacaagctgctg
tacaacctggtcacgcagaacaagtgggaacgggtgatggtgttcgccaaccgcaaggac
gaggtgcgtcgcatcgaggaaaaactggtgcgcgacggcatcaacgccgcccaactgtcg
ggcgacgtgccgcagcacaagcgtatccgcaccctggagagcttccgtgaagggcgcatc
accgtgctggtggccaccgacgtggccggccgtggcatccacatcgacggcatcagccat
gtgatcaacttcaccctgccggaagacccggacgactacgtgcaccgcatcggccgcacc
ggtcgcgccggcaccagcggcgtgtcgatcagctttgccggcgaggacgattcgtaccag
ttgccggcgatcgaagagttgctggggcgcaagatcaagtgcgagatgccgccggacgag
ctgttgaagcccgtgccgcgcaagcatcactga
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