Pseudomonas sp. CCOS 191: CCOS191_4564
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Entry
CCOS191_4564 CDS
T03967
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psec
Pseudomonas sp. CCOS 191
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psec03400
]
CCOS191_4564 (phrB)
Enzymes [BR:
psec01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CCOS191_4564 (phrB)
DNA repair and recombination proteins [BR:
psec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CCOS191_4564 (phrB)
Prokaryotic type
CCOS191_4564 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CRI59100
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All DBs
Position
I:5144932..5146368
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AA seq
478 aa
AA seq
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MQLIWLRSDLRVDDNTALAAACQRGPTVALWVASPGQWLAHDDAPCKVDFWLRNLRLLRQ
SLAALNIPLLIRQVDTWADAPQCVLDVCRQHSIEAVHWNEEYGINETRRDEATRNLLQQA
GIGATAHLDQLLFRPGSVMTRGGQYFQVFSQFKRVCLEHLHRSLPSLLPPVLRQEALGIH
GDVIPEHIDGFEAPSDALRQHWPAGEDEARQRLQHFIDETVEDYAQLRDLPARAGTSQLS
PYLAAGVVSPRQCLHAALGSNRGEFDSGSVGVQTWVNELLWREFYKHTLVGYPRVSRHRA
FRPHTEALPWRNAPADLQAWEEGRTGFPIIDAAMRQLLDTGWMHNRLRMIVAMFLSKNLL
IDWRHGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVTQSQRFDPKGVFIR
RWLPELKDRDDKSIHYPVKSADLFATNNYSGPIVDLDSSRQRALEAFKSLSSWQDQGA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgatatggctacgcagtgacctgcgtgtggacgataacaccgctctcgcggcc
gcctgccagcgcggcccgaccgtggccctgtgggtcgccagccctggccagtggctggct
catgacgacgcaccctgcaaagtcgacttctggctgcgcaacctgcggttgctgcgccag
tcactcgcggcgctgaatattccgctattgattcgccaagtcgatacgtgggcagacgcc
ccgcaatgcgtgctcgatgtctgccgccagcacagcatcgaggccgtgcactggaacgag
gaatacggcatcaacgagacccggcgcgacgaagcgactcggaacctgctgcaacaggca
ggaatcggcgctaccgcccacctcgaccagttgctgttcaggcccggtagcgtaatgacc
cgcggtggccagtatttccaggtcttcagccagttcaaacgggtctgcctggaacatctg
caccgcagcctcccctctctccttccacctgtacttcgccaagaggcgctgggtattcac
ggcgacgtcatacccgagcatatcgacggcttcgaggcaccttccgacgcactgcgccag
cactggcccgccggtgaggatgaagcacggcagcggttgcaacacttcatcgacgaaacc
gtcgaggactacgcgcaactgcgcgacctgcccgcccgggccggtaccagccagctttcg
ccttacctggctgcgggtgtggtctcgccacgtcagtgcctgcacgcggcccttgggagc
aaccggggtgaattcgacagtggcagcgtcggcgtgcagacctgggtcaacgagctgctg
tggcgcgagttctacaaacacacgctggtgggctatccccgggtctcgcggcatcgcgcc
ttccgtccgcacaccgaggcgctaccctggcgcaatgcgcctgccgacctgcaggcctgg
gaggaaggccgcaccggcttccctatcatcgatgccgccatgcgtcagttgctggacacc
ggctggatgcacaaccggttgcgcatgatcgtcgccatgtttctcagcaagaacctgctg
atcgactggcggcatggcgagcggcatttcatgcgccacctgatagacggcgatctggcc
gccaacaacggcggctggcagtggagtgcctctacaggcactgacgcagtgccctatttc
cgcattttcaatcctgttacccagtcacagcgcttcgacccgaagggtgtgttcattcgt
cgatggctgccggaattgaaggacagggacgataaatcgattcactacccggtgaaatct
gccgatctatttgctactaataattactcgggcccgatagtcgatctcgatagcagtcgc
caacgcgcattggaagccttcaaaagcttgtccagctggcaggatcagggggcatag
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