Pseudomonas sp. CCOS 191: CCOS191_4899
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Entry
CCOS191_4899 CDS
T03967
Symbol
vfr
Name
(GenBank) Cyclic AMP receptor-like protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
psec
Pseudomonas sp. CCOS 191
Pathway
psec02020
Two-component system
psec02024
Quorum sensing
psec02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CCOS191_4899 (vfr)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CCOS191_4899 (vfr)
02025 Biofilm formation - Pseudomonas aeruginosa
CCOS191_4899 (vfr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psec03000
]
CCOS191_4899 (vfr)
Transcription factors [BR:
psec03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
CCOS191_4899 (vfr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Crp
HTH_Crp_2
HVO_A0261_N
TrmB
MarR
bAvd
HTH_11
HTH_28
Motif
Other DBs
NCBI-ProteinID:
CRI59435
LinkDB
All DBs
Position
I:5518530..5519174
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AA seq
214 aa
AA seq
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MVSSALPPKIKNIDKLLAHCQRRRYAAKSNIICAGDRAETLSFIIKGSVTILIEDDDGHE
MIIAYLNSGDFFGELGLFEPAGQEHQRSAWVRAKTECEVAEIGYDKFRELARLEPDILYA
LGSQMAQRLRNTTRKVGDLAFFDVTGRVARCLLDLCKQPDAMTHPDGMQIKITRQEIGRI
VGCSREMVGRVLKDLEERSLVQVKGKTMVVYGTR
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggtctcctcagccctgccacccaagatcaagaacatcgacaagctgctggcccactgc
caacgccgccgctacgccgccaagagcaacatcatctgcgccggtgaccgggccgagacc
ttgtcgttcatcatcaagggttcggtgaccatcctgatcgaggacgacgacggccacgag
atgatcatcgcctacctcaacagcggtgacttcttcggcgagctggggctgttcgaaccc
gccggccaggagcatcagcgcagcgcctgggtccgtgccaagaccgagtgcgaagtggcc
gagatcggttacgacaagttccgggagctggcgcgtctggagccggacatcctctacgcc
ctgggtagccagatggcccagcgcctgcgcaacaccacacgcaaggtcggcgacctggcg
ttcttcgacgtcaccggccgcgtcgcccgctgcctgctcgacctgtgcaagcagcctgat
gccatgacccaccccgatggcatgcagatcaagatcactcgccaggagatcggtcgtatc
gtcggttgttcacgggagatggtcggccgcgtcctcaaggacctcgaggaacgcagcctg
gtgcaggtcaagggtaagaccatggtggtctacggcacccgctag
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