Pseudomonas sp. CCOS 191: CCOS191_4971
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Entry
CCOS191_4971 CDS
T03967
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psec
Pseudomonas sp. CCOS 191
Pathway
psec03030
DNA replication
psec03430
Mismatch repair
psec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCOS191_4971
03430 Mismatch repair
CCOS191_4971
03440 Homologous recombination
CCOS191_4971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psec03032
]
CCOS191_4971
03400 DNA repair and recombination proteins [BR:
psec03400
]
CCOS191_4971
Enzymes [BR:
psec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCOS191_4971
DNA replication proteins [BR:
psec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCOS191_4971
DNA repair and recombination proteins [BR:
psec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCOS191_4971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
CRI59507
LinkDB
All DBs
Position
I:5603321..5604031
Genome browser
AA seq
236 aa
AA seq
DB search
MNLFAWLRPTAPELDAALQRRLAALPGPAPLGVCSLREQRWVVLDLETSGLNLNRDQVLS
IGAVAIEDGAIDLGRPFERTLRRPEQRTNASVLIHGLGPSALAAGCEPAEALLDLMTFIG
DSPVLAFHAPFDQRMLARALKDSLGLRLQHPFLDVAELAPMLNPDTVLREAGLDDWIARF
GLEVQARHHASADAQVTAELALILFSQARRQQLDSPLQLEQRVRQWRRRKAQHHGL
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
gtgaacctgttcgcctggttgcgccccacagctcccgaactcgatgcggcgctgcagcgg
cgcctggccgcgctgcccggccctgcgcctctgggtgtgtgctccctgcgcgaacagcgc
tgggtggtgctcgacctggagaccagcggccttaatctcaatcgcgaccaggtgctgtcg
atcggcgcggtggccatcgaggacggtgccatcgacctcggtcggccgttcgagcggacc
ctgcgccgccccgaacagagaaccaacgccagcgtgctgatccacggcctgggcccaagc
gccctggccgccggctgcgaaccggccgaagccctgctcgacctgatgacgttcatcggc
gacagtccggtgctggcgttccatgccccgttcgaccagcgcatgctggcccgggcgttg
aaggacagcctgggcctgcgcctgcagcatccgtttctcgatgtggcggagctggcgccg
atgctcaaccccgacaccgtgctgcgcgaggccgggctggacgactggattgcccgtttc
ggcctcgaagtccaggcccgtcaccatgccagcgccgatgcccaggtgaccgcggaactg
gcgttgatcctgttcagccaggcgcgccgccagcaactggacagcccgctgcagctggag
cagcgggtgcgccagtggcgacgacgcaaggcgcagcaccacggcctctga
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