Pseudomonas sp. CCOS 191: CCOS191_5041 Help Entry CCOS191_5041      CDS       T03967                                  Name (GenBank) type VI secretion protein IcmF   KO K11891   type VI secretion system protein ImpL Organism psec  Pseudomonas sp. CCOS 191 Pathway psec02025   Biofilm formation - Pseudomonas aeruginosa psec03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:psec00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     CCOS191_5041  09140 Cellular Processes   09145 Cellular community - prokaryotes    02025 Biofilm formation - Pseudomonas aeruginosa     CCOS191_5041  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:psec02044]     CCOS191_5041 Secretion system [BR:psec02044]  Type VI secretion system   Imp/Vas secretion system core components    CCOS191_5041 SSDB OrthologParalogGFIT Motif Pfam:  IcmF-related_N IcmF-related IcmF_C IcmF_helical nSTAND_NTPase5 Motif Other DBs NCBI-ProteinID:  CRI59577 LinkDB All DBs Position I:complement(5692719..5696225) Genome browser AA seq 1168 aa AA seqDB search MKAFFSFVIRWVIPLLGLLALSLIIWFLGPLLDMLVPAAPRLVLIALLFAMWIAYRVWRI VQARRQAAKVMQSLAAETAPDPASVATAEELATLRQRMDEALVLLKKARLGGDERRNLYE LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGEGAIRGVGGTRNCDWWFTDQAVLLDTAG RYTTQDSHAQVDKAAWLGFLDLLKSQRSRRPIDGAFIAISLSDLLLGSDAERAAHAAAIR TRIQELYSQLGVRFPIYLMLTKLDLVPGFMEFFDTLSKEERAQVWGMTFPLDDGQQGEGP LAQFGNEFALLEQRLNQRLVERLQQERDPARRDLVYGFVQQFAALRGNLKTFLDGIFKPN AFEERALLRGVYFTSGTQEGSPIDRLIGSMAQSMGLDRAHLARQNGTGRSYFIEKLFSAV AFAERGLVGSNPKVEQRRKWIARGALALSVALVLVVGTLWTLSYRANQQYIAEVDSRLKP LGKSVQELSPAQRNVVEVLPLLNGVRRLAEDPPGWAEGLGLYQGDMLEGESDSVYRKLLI AIFAPRLVTRIEEQLYAGGPSDYLYEGLKAYLMLADGEHYDVEFIKAWVTLDWERSLPRD LAPDLRQALEQHLAALFDKRPPNARLDQRLIDDTRRQLQQLPVAQRVYDRVKRQKLPAGV SDFRVSDAAGRDAALVFRFKDGKPLSEPLPGIFTVEGYRKAFLAASLAHSETLAEERWVL GREASESADAKRLADDVLQLYYQDYIRHWDALLADLDFVPITSVGQAADVLRVLSGPTSP MKKLLQAVAKETNLAQPTTLDKVQAKAEQAGVDQLRQRLGGLLGDAPLPSDNPAAREVDP VTAHFAELAALVETGEGQPAAIDGLLTDLNALYVQVSAMVGASGDALLGEAKNQAQAAAQ RVALGAARQPKVVQNLVSSVLGSTHNLVMGGVRNQLNAAWTSEVVNVYRQSLSGRYPLVA GSSRDATLEDFGLFFGVGGVMDNYFRKYLQPYVNTSSTPWSWQPGAAQKLGINSNVLYTF QRAASIRDAFFRNSNGVQPGVRFELKPVAMDATITQFLLDLDGQQVSYDHGPSRPVALQW PNPNSIGVVRLSISPPSASGRSGLTVEGPWAWFRLLDQSDLVAGGSPERFNLRLRVDGAS VSYELRASSAFNPFRSRVLSGFSLPEHL NT seq 3507 nt NT seq  +upstreamnt  +downstreamnt gtgaaggcgtttttcagttttgtcattcgctgggtgattccgctgctgggcctgctggcc ctgagcttgatcatctggttcctcggcccgttgctggacatgctggtgccggccgctccg cgcctggtgctgatcgccctgttgttcgcgatgtggatcgcctaccgcgtgtggcgtatc gtccaggcccgccgtcaagcggccaaggtcatgcagagcctggccgcggagaccgcgccg gaccccgccagcgtggccaccgccgaagaactggcgaccctgcgccagcgcatggacgaa gccctggtgctgctgaagaaggcacgccttggcggcgacgagcgacgcaacctgtatgaa ctgccgtggtacgtgatcatcggcccgcccggctcgggcaagaccaccgcgctggtcaat tccggcctgcacttcccgctggcggcgcagctgggcgagggcgccatccgtggtgttggc ggtacgcgcaactgcgactggtggttcaccgaccaggccgtgctgctggacaccgccggc cgctacaccacccaggacagccatgcccaggtggacaaggcggcctggctgggcttcctc gacctgctcaagagccaacgctcacgccgccccatcgacggcgcgttcatcgccatcagc ctgtccgacctgctgctgggcagcgacgccgagcgcgctgcccatgcggcggcgatccgt acccgcatccaggagctgtacagccagctgggcgtgcgcttcccgatctacctgatgctg accaagctcgacctggtgccggggttcatggagttcttcgacaccctgagcaaggaagag cgcgcccaggtttggggcatgaccttcccgctcgacgatggccagcagggcgaagggccg ctggcgcagttcggcaatgaattcgccttgctggagcagcgcctgaaccaacgcctggtc gagcgcctgcagcaggagcgcgatccggcgcggcgcgacctggtctacggtttcgtccag cagttcgccgccctgcgcggcaacctgaaaaccttcctcgacggcatcttcaagcccaac gccttcgaagagcgtgcactgctgcgcggtgtgtacttcaccagcggtacccaggaaggc agtcccatcgaccgcctgatcggcagcatggcccagagcatgggcctggaccgtgcacac ctggcgcgacaaaacggcaccgggcgcagctacttcatcgagaagctgttcagcgccgtg gccttcgccgagcgcggcctggtcggcagcaacccgaaggtcgagcagcggcgcaagtgg atcgcccgtggcgccctggccctgagcgtggccctggtgctggtggtcggtaccctgtgg accctgagctaccgcgccaaccagcaatacatcgccgaggtcgacagccgcctcaagccg ctgggcaagagcgtgcaggaactgagcccggcgcagcgcaacgtggtcgaagtgctgccg ctgctcaatggcgtgcgccgcctggccgaggatccgcccggctgggccgagggcctgggg ctgtatcagggcgacatgctcgaaggcgagtcggacagcgtctatcgcaagctgctgatc gccatcttcgccccgcgcctggtcactcgcatcgaggagcagttgtacgcaggggggccg tccgactacctctacgaggggctcaaggcctacctgatgctggccgacggcgaacactac gacgtcgagttcatcaaggcctgggtcaccctcgactgggagcgcagtctgccgcgcgac ctggccccggacctgcgccaggccctggagcagcacctggctgcactgttcgacaagcgc ccgccgaacgcccgcctggaccagcgcctgatcgacgacacccgtcgccagttgcagcaa ctgccggtggcccaacgggtctacgaccgggtcaagcgccagaagctgcccgccggggtc agcgacttccgggtcagcgatgccgccgggcgtgacgccgcgctggtgttccgcttcaag gacggcaagccgctgagcgagccgctgccgggcattttcaccgtcgagggctaccgcaag gccttcctcgccgccagcctggcccacagcgagaccctggccgaggagcgctgggtgctg ggtcgcgaggccagcgaatcggccgatgccaagcgcctggccgacgatgtgctgcagctg tactaccaggactacatccgccattgggatgccttgttggccgacctggacttcgtgccg atcaccagcgtcggccaggccgccgatgtgctgcgggtgctgtccgggccgacctcgccg atgaagaagctgctgcaggcggtcgccaaggagaccaacctggcgcagccgaccaccctc gacaaggtccaggccaaggctgaacaggccggcgtcgatcagttgcgccaacgcctgggt ggcctgctcggtgatgcgccgctacccagcgacaacccggccgcccgtgaggtggacccg gtcaccgcgcacttcgccgagctggctgccctggtggaaaccggcgaaggccagcctgcg gccatcgacggcctgcttaccgacctcaatgccctgtacgttcaggtcagcgccatggtc ggcgccagtggcgacgcgctgctgggcgaggccaagaaccaggcccaggctgcggcgcag cgtgttgccctgggggccgcgcgtcagccgaaggtggtgcagaacctggtgagctcggtg cttggctcgacccacaacctggtcatgggcggggtgcgcaatcagctcaacgccgcctgg accagcgaggtggtcaacgtctatcgccagtccctcagcggtcgctatccgttggtggcc ggcagttcgcgggatgcgaccctggaggacttcggcctgttcttcggcgtcggtggggtg atggacaactacttccgcaagtacctgcaaccctacgtcaacacttcgagcacaccctgg agctggcagcccggcgcggcgcagaagctggggatcaacagcaatgtgctgtacaccttc cagcgcgcggcgagcatccgcgacgcgttcttccgcaacagcaacggcgtgcagccgggg gtgcgcttcgagctcaagccggtggcgatggacgcgaccatcacccagttcctgctcgac ctcgacggccagcaggtgagctacgaccacggcccgagccggccggtggcgttgcagtgg ccgaaccccaacagcatcggcgtagtgcgcctgtcgatctcgccgccctcggccagcggt cgttcggggctgaccgtggaagggccgtgggcctggttccgcctgcttgaccagtccgac ctggtggccggtggctcgccggaacgcttcaacctgcgcctgcgcgtcgacggcgccagc gtgtcctacgagctgcgtgccagcagcgccttcaacccgttccgcagccgagtgctcagc ggtttcagcctgccggagcatctgtga

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