Stutzerimonas frequens: DM292_02085
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Entry
DM292_02085 CDS
T05921
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psed
Stutzerimonas frequens
Brite
KEGG Orthology (KO) [BR:
psed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psed03016
]
DM292_02085
Enzymes [BR:
psed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DM292_02085
Transfer RNA biogenesis [BR:
psed03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DM292_02085
Prokaryotic type
DM292_02085
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TruB_C
PUA_3
SF3b1
Motif
Other DBs
NCBI-ProteinID:
AWT09096
LinkDB
All DBs
Position
461954..462871
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AA seq
305 aa
AA seq
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MAQVKRVRRNVSGIILLDKPRGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKAYETVMQLGVTTTTADAEGEVLERKPVVVTPEQLEALLPQFRGDIL
QVPPMYSALKRDGQPLYKLARAGEVVEREPRSVNIARLELLALDGDKARLAVTCSKGTYI
RTLVEDIGRLLGCGAHVAELRRTQAGPFDLSQTVTLETLERAHADGGSEALDGFLQPVDS
GLEHWPLLQLSEHSAYYWLHGQPVRAPEAPQYGMVRVQDNNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaggtcaagcgtgtacgacgcaatgtcagtggcatcatcctgctggacaagccg
cgcgggttcacctccaacgcggcgctgcagaaggttcgctggctgctcaatgcggagaag
gccgggcataccggtagcctcgatccactggcgacgggggtgttgccgctgtgtttcgga
gaagccaccaagttctcgcagtaccttctggatgcggacaaggcctacgagacggtgatg
cagctcggcgtgaccactaccaccgcggatgccgagggcgaggttctggagcgtaagccg
gtggtggttacccctgagcagctggaggcactgctgccgcagtttcgcggcgacattctg
caggtgccgccgatgtactcggcgctcaagcgcgacggccagccgctatacaagctggcg
cgtgccggtgaagtggtggagcgcgagccgcgttctgttaatattgcgcgcttggagttg
ctcgcgctcgacggcgacaaggcgcgactggctgtgacctgcagcaagggcacctatatc
cgcactctggttgaagacatcggccggttgctcggctgcggcgcgcatgtcgccgagctg
aggcgcacccaggccggtccgttcgacctttcgcagacggtgacgctcgagacactggag
cgggcgcatgctgacggcggctccgaggccctggatggattcctgcaaccggtggacagc
gggctggagcattggccgttgttgcagttgtcggagcacagcgcttactactggctgcac
ggacagccggtgcgggcaccggaggcgccgcagtacggcatggttcgcgtacaggataac
aatggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcattgcgccccgtcgg
ttgattcggtcggaatga
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