Stutzerimonas frequens: DM292_03930
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Entry
DM292_03930 CDS
T05921
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psed
Stutzerimonas frequens
Pathway
psed00061
Fatty acid biosynthesis
psed00071
Fatty acid degradation
psed01100
Metabolic pathways
psed01212
Fatty acid metabolism
psed02024
Quorum sensing
psed04146
Peroxisome
Module
psed_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psed00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DM292_03930
00071 Fatty acid degradation
DM292_03930
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DM292_03930
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM292_03930
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psed01004
]
DM292_03930
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psed04147
]
DM292_03930
Enzymes [BR:
psed01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DM292_03930
Lipid biosynthesis proteins [BR:
psed01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DM292_03930
Exosome [BR:
psed04147
]
Exosomal proteins
Exosomal proteins of breast milk
DM292_03930
Exosomal proteins of breast cancer cells
DM292_03930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AWT09421
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Position
849890..851581
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AA seq
563 aa
AA seq
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MTDNFWKDKYPVGVSSEINPNEYQNIQAVLKQSCERFADKPAFSSLGKTLTYGELYKLSG
DFAAYLQQNTDLQPGDRIAVQLPNLIQYPIVVFGAMRAGLIVVNTNPLYTAREMEHQFND
AGAKALVCLANMAHLAEEVLPKTGIKHVVITEVADMLPPLKRMLINAVVKHVKKMVPAYS
LPKAVKLNDALALGRGKAVSEASPKSDEVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCK
ALMGSNLNDGSEVLIAPLPLYHIYAFTFHCMAMMLSGNHNILISNPRDLPAMIKDLSKYR
FSGFVGLNTLFVALCNSEDFRKLDFSALKITLSGGMALQLATAERWKQVTGCSICEGYGL
TETSPVASVNPIEHIQLGSIGIPVPSTQFKVINDDGQDLPQGEIGELCIKGPQVMKGYWQ
RPEATAEVIDADGWFKTGDIGVIQEDGYIRIVDRKKDMILVSGFNVYPNELEDVLASLPG
VLQCAAIGVPDEKSGEAIKLFVVVKPGESLTKEQVMQHMHDNLTGYKRPRYVEFRDSLPT
TNVGKILRRELRDEELRKLGHKQ
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataacttctggaaggataagtatcccgttggtgtctccagcgagatcaatccc
aacgagtaccagaacattcaggctgtgctcaagcagtcctgcgagcgtttcgcagacaag
ccggccttcagtagcctcggcaagaccctgacctacggtgagctgtacaagctgtccggc
gatttcgcagcctacctgcagcagaacaccgacctccagcccggcgaccgcatcgccgta
cagctgcccaacctgatccagtatcccatcgtggtgttcggtgccatgcgcgccgggctc
atagtggtcaataccaacccgctgtacaccgcgcgggagatggaacaccagttcaacgac
gccggcgccaaggcgctggtctgcctggccaacatggcgcacctggccgaggaagtgcta
cccaagaccggcatcaaacacgtggtcatcaccgaagtcgccgacatgctgccgccgctc
aagcgcatgctgatcaacgcggtggtcaagcacgtgaagaagatggtgccggcctacagc
ctgccgaaagcggtcaagctcaacgacgcgctggcactcggccgcggcaaggcggtgagc
gaggcttcgccgaagagcgacgaggtggccgtgctgcagtacaccggcggcaccaccggc
gtggccaagggcgccatgctcacgcaccgcaacctcgtcgccaacatgctgcagtgcaag
gcgctgatgggttcgaacctcaatgacggcagcgaagtgctgatcgcgccgttgccgctc
taccacatctacgccttcacctttcactgcatggcgatgatgctcagcggcaaccacaac
atcctgatctccaacccgcgcgacctgccagcgatgatcaaggatctgtccaagtaccgc
ttcagcggcttcgtcggcctgaatacgctgttcgtcgcgctgtgcaacagcgaggacttc
cgcaagctcgatttctcggcgctgaagatcaccctgtccggtggcatggcgctgcagctg
gccacggccgagcgctggaagcaggtcaccggatgctcgatctgcgaaggctacggcctg
accgagaccagcccggtggcctcggtcaacccgatcgagcacatccagctcggctccatc
ggcattccggtgccctcgacgcagttcaaggtcatcaatgacgacggtcaggaccttcca
cagggcgagatcggcgagttgtgcatcaagggcccgcaggtgatgaagggctactggcag
cgccccgaggccaccgctgaggtgatcgacgcggatggttggttcaagaccggcgacatc
ggcgtgatccaggaagacggctacatccgcatcgtcgaccgcaagaaggacatgatcctg
gtgtccggcttcaatgtgtatcccaacgagctggaagacgtgctcgccagcctgccgggc
gtgctgcagtgcgctgccatcggcgtcccggacgagaaatccggtgaggcgatcaagctg
ttcgtggtggtcaaaccgggcgagagcctgaccaaggaacaggtcatgcagcacatgcat
gacaacctgacgggctacaagcgcccgcgctacgtggagttccgcgacagcctgccgacc
accaacgtcggcaaaatcctgcgccgcgagctgcgtgacgaggagctgcgcaagctcggc
cacaagcagtaa
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