Stutzerimonas frequens: DM292_03985
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Entry
DM292_03985 CDS
T05921
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
psed
Stutzerimonas frequens
Brite
KEGG Orthology (KO) [BR:
psed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psed03016
]
DM292_03985
Enzymes [BR:
psed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
DM292_03985
Transfer RNA biogenesis [BR:
psed03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
DM292_03985
Prokaryotic type
DM292_03985
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Paralog
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AWT09432
LinkDB
All DBs
Position
complement(867830..868837)
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AA seq
335 aa
AA seq
DB search
MDLLFLGTSSGTPTRARNVSALALLEDTGKAWYLIDCGEGTQHRLLRTPLSLHDLRAICI
THVHGDHCYGLPGLLASAGMMGRKAPLTIIAPQGIETWVRTTLSMSQSWLSYELDFHAVE
TLSEWRSPNMRIEATELSHRVPCYGYSFSEARPDPRLDIERLERDGVPRGPLWGQLARGF
DIEHEGRVLRSDDYLSFSRTPRRIVVGGDNDRPELFAEACRDAQLLVHEATYTEAVANDA
RNDFGHSTAAAVARFAQAVGLPNLVLTHFSARYQKSAGRGHSIEHLRAEAAALYAGQLLL
AEDYMRLHLGKDGNLTRVEPPDSSRPPRRGSESGA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtggacctgctatttctcggcacctcatccggcacacccacccgcgcgcgcaacgtcagc
gcgctggcgctgctggaggacaccggcaaggcctggtacctgatcgattgcggcgaaggc
acccagcatcgcctgctgcgcacgccgctgtcgctgcacgacctgcgcgccatctgcatc
acccacgtgcatggcgatcactgctacggcctgcccggcctgctggccagtgccggcatg
atggggcgcaaggcaccgctgacgatcatcgccccgcagggcatcgagacctgggtgcgg
acgaccctgagcatgagccagagctggctgagctacgagctggactttcatgcggtcgag
acactgagcgagtggcgcagcccgaacatgcgcatcgaggcgaccgagctgtcccatcgc
gtgccctgctacggctacagcttcagcgaggcacgccccgacccgcgcctggacatcgaa
cgcctggaacgtgacggcgtgccgcgcggcccactctggggccagctggcgcgcggcttc
gacatcgagcatgaaggccgagtactgcgcagcgacgattacctgagcttcagccgcacc
ccgcgacgcatcgtcgtcggtggcgataacgaccgacccgagctgttcgccgaagcctgt
cgtgacgcgcagctgctggtacacgaggcgacctataccgaggcggtggccaacgacgcg
cgcaatgacttcggccacagcactgcggcagcggtggcgcgctttgcacaggcagtcggg
ttgccgaacctggtgctcacccatttcagcgcgcgctaccagaagagcgccggtcgcggc
cactcgatcgagcatctgcgggctgaagccgctgcactgtacgccggccagctgctgctc
gccgaggactacatgcgcctgcatctgggcaaagacggcaacctgacccgcgtcgagcca
cccgacagctcgcgtccgccacgtcgcggcagcgagagcggcgcctga
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