Stutzerimonas frequens: DM292_04365
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Entry
DM292_04365 CDS
T05921
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
psed
Stutzerimonas frequens
Brite
KEGG Orthology (KO) [BR:
psed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psed03000
]
DM292_04365
Transcription factors [BR:
psed03000
]
Prokaryotic type
Helix-turn-helix
Other families
DM292_04365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_5
AAA_2
AAA
HTH_30
HTH_28
Mg_chelatase
HTH_23
HTH_1
AAA_16
HTH_20
IclR_C
HTH_50
RWP-RK
HTH_29
HTH_ParB
AAA_3
DUF815
Motif
Other DBs
NCBI-ProteinID:
AWT09502
LinkDB
All DBs
Position
946793..948724
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AA seq
643 aa
AA seq
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MNLFSGPVSHIDAVLTLANAPHLPGDRDPIIARSWRRCVHDYGLDPTRPSEARFVPRQVL
REHQDQADELINVARAGVEQLYRQVAELGYVILLTDNRGIAVQFLGDPADEKAHRKTGLY
LGSDWGEDHAGTCAVGTCIKEQQALTCHQHDHFSVWHTNLTCTAVPMFNPQGQLLAVLDI
SALHSPPSKDSQTFALQLVKQYARMIEDAYFLRLYRDRPILCFDGSREFVLINRRYLLAL
GDQGELLAGNTAARGLLAEHGLALSGPFGTSNQVHVDQLFDCELADVLSIPYASHDQVRA
FRTHRHQLFFAALMEPRRRVPVTAERSSPAGHSPLDALADDDPAMRKMLARAHRLCSEPL
NVLLNGETGTGKERLAKALHESGSRRSKPFVAINCGAMPESLIESELFGYAPGTFTGARS
KGMRGLIQQADGGTLFLDEIGDMPLHLQTRLLRVLAEQEVTPLGAERPVKVDIRVIAASH
RDLRQMVESGAFREDLFYRLNGASLKLPPLRERADKAFLIDRVFAELAEGRPGHPHLRGD
AISALLAYPWPGNIRELRNVLQYALATCEGDEITVQDLPDECLPRILARGRQAEAEPEPE
SAAALRETLRRHRWNISAAARELGVSRPTMYRRMRLLGIEAPI
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgttctccgggcccgtgagccatatcgacgcggtgctgaccctggctaatgcg
ccgcatcttcctggtgaccgcgacccgatcatcgcccgctcctggcgccgctgcgtgcac
gactacggtctggatccgacgcgcccgtccgaggcgcgcttcgtgccgcggcaggtgctg
cgcgagcaccaggaccaggcagacgagctgatcaacgtggcccgtgcgggcgtggagcag
ctctaccggcaggtagccgagctgggctacgtgattctgctgaccgacaaccgcggcatc
gccgtgcagtttctcggcgatccggcggacgagaaggcgcatcgcaagaccggcctgtat
ctgggctcggactggggcgaggaccacgccggcacctgcgcggtcggcacctgcatcaag
gagcagcaggcgctgacctgccaccagcacgatcacttcagcgtctggcataccaacctc
acctgcacggcggtgccgatgttcaacccccaggggcaactgctggcggtgctggacatc
tcggcgctgcattcgccgccgtccaaggattcgcagaccttcgccctgcagctggtcaaa
cagtacgcgcggatgatcgaggacgcctacttcctgcgcctgtatcgcgaccggccgatc
ctctgtttcgacggctcgcgggagttcgtcctgatcaaccgtcgctacctgctggcgctg
ggcgatcagggcgagctgctggctggcaacacggctgcgcgcggactgctggctgaacat
gggttggcactgtccggcccgttcggtacctcgaaccaagtgcatgtcgatcagctgttc
gactgcgaactggcggacgtgctcagcattccctacgccagccacgatcaggtccgcgcc
tttcgcacccatcgtcatcagctgttcttcgctgcgctgatggagccgcgccgtcgtgtg
ccggtaacggcggagcgcagctcgccggctgggcattcgccactggatgcgctggccgac
gatgacccggccatgcgcaagatgctcgcccgcgcgcaccggctgtgcagcgagccgctg
aacgtcttgctcaatggcgagaccggtaccggcaaggaacgtctggccaaggcgctgcac
gagagcggtagccgacgcagcaagccgttcgtcgcgatcaactgcggcgcgatgcccgaa
tcgctgatcgagagcgagctgttcggctacgccccaggtaccttcactggcgcgcgcagc
aagggcatgcgcggcctgatccagcaggccgacggcggcaccttgttcctcgacgagatc
ggcgacatgccgctgcacctgcagacccgcctgctgcgtgtactggccgaacaggaagtg
acgccgctgggcgccgagcggccggtgaaggtggacatccgcgtgattgcggccagccac
cgtgacctgcggcagatggtggagagcggggcgtttcgcgaggacctgttctaccgcctc
aatggcgcgtcgctgaagctgccgccgttacgtgagcgggcggacaaggcgttcctgatc
gaccgtgtatttgccgagttggccgagggtcgaccgggtcacccgcacctgcgtggtgat
gcgataagcgcgctgttggcctatccctggccgggcaacattcgcgagctgcgtaacgtg
ctgcagtacgcgctggcaacgtgcgagggggacgagatcaccgtgcaggatctgccggat
gaatgcctgccgcgcattcttgcccgcggtcggcaagccgaggcggagccggaacccgag
tcggccgcggccctgcgtgagacgctgcgtcgccatcgctggaacatcagtgccgcggcg
cgcgaactcggcgtttcgcggccgacgatgtatcggcgcatgcgcctgctggggatcgag
gcgccgatctga
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