KEGG   Stutzerimonas frequens: DM292_05340
Entry
DM292_05340       CDS       T05921                                 
Name
(GenBank) RNA helicase
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
psed  Stutzerimonas frequens
Brite
KEGG Orthology (KO) [BR:psed00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:psed03009]
    DM292_05340
Enzymes [BR:psed01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DM292_05340
Ribosome biogenesis [BR:psed03009]
 Prokaryotic type
  rRNA helicases
   DM292_05340
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 AAA_22 P-loop_SecA Abhydrolase_1
Other DBs
NCBI-ProteinID: AWT12639
LinkDB
Position
1135252..1136583
AA seq 443 aa
MFDQFALHERLLKAVAELKFVEPTPVQVAAIPPALEGRDLRVTAQTGSGKTAAFVLPMLN
RLIGDAQPRVDVRALILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDVLIGTPGRLIEHLNAGNLILKDVEVLVIDEADRMLDMGFAEDMQRLVGECEKRQQTL
LFSATSGGAGLREMVGKVLNDPLHLQLNRVSELNESTRQQIITADDPAHKEKLVHWLLAN
ETYQKAVIFTNTRAQADRLYGHLVAGDIKVFVLHGEKDQKERKLAIERLKQGGVKVLVAT
DVAARGLDIEGMDLVINFDMPRSGDEYVHRIGRTGRAGAEGLAISLICHNDWNLMSSIER
YLKQRFEKRVIKGLKGTYQGPKNLKASGKAAGSKKKKIDKKKGVEKKSKPAGKRPNGAKR
ETPSPVVSQDGMAPLKRKKPTAE
NT seq 1332 nt   +upstreamnt  +downstreamnt
ttgtttgaccaattcgccctgcacgaacgcctgctcaaggccgtcgccgaactcaaattc
gtcgagccgaccccggtgcaggtggcggcgattccgccggcgctggaagggcgcgatctg
cgtgtgacggcccagaccggcagtggcaagacggctgcgttcgtgctgccgatgctcaac
cgtctgatcggcgatgcccagccgcgggtcgacgtgcgcgcgctgatcctattgccgacc
cgcgaactggcccagcagaccctcaaggaagtcgagcgcttctcgcagttcaccttcatc
aagtccggcctgatcaccggtggtgaggacttcaaggtccaggccgcgatgctgcgcaag
gtgccggacgtgctgattggcacgccgggccggctgatcgagcatctgaatgcgggcaac
ctgatcctcaaggatgtcgaggttctggtgatcgacgaggccgatcgcatgctcgacatg
ggttttgccgaagacatgcagcgtctggtaggcgaatgcgaaaagcgtcagcagacgctg
ctgttttctgccaccagcggcggcgcaggcctgcgcgagatggtcggcaaggtgctgaat
gatccgctgcaccttcagctcaaccgcgtcagcgagctgaacgagtcgacccggcagcag
atcatcaccgccgacgatccggcgcataaggaaaagctggtgcattggctgctggccaac
gagacctatcagaaggcggtcatcttcaccaacacccgcgcccaggccgatcgtctgtac
ggtcatttggtggcaggcgacatcaaggtcttcgtgctgcacggggagaaggaccagaag
gagcgcaagctcgccatcgagcggctcaaacagggcggtgtgaaggtgctggtggccacc
gatgtggctgcgcgcggcctggatatcgaaggcatggacctggtgatcaacttcgacatg
ccgcgttcgggtgacgagtacgtgcaccgcatcggccgtaccggacgtgccggcgccgag
ggcctggcgatctcgctgatctgccataacgactggaacctgatgtcgagcatcgagcgc
tacctcaagcagcgcttcgagaagcgggtgatcaaggggctgaaaggcacctatcagggg
ccgaagaacctcaaggcttcgggcaaggccgctggcagcaagaagaaaaagatcgacaag
aagaagggcgtggagaagaagtccaagcctgccggcaagcgcccgaacggtgccaagcgg
gagacgccgtcacctgtagtcagccaggacggcatggcaccgctcaagcgcaagaagccg
acggccgagtga

DBGET integrated database retrieval system