Stutzerimonas frequens: DM292_06505
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Entry
DM292_06505 CDS
T05921
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psed
Stutzerimonas frequens
Pathway
psed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM292_06505 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psed03019
]
DM292_06505 (recQ)
03400 DNA repair and recombination proteins [BR:
psed03400
]
DM292_06505 (recQ)
Enzymes [BR:
psed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DM292_06505 (recQ)
Messenger RNA biogenesis [BR:
psed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DM292_06505 (recQ)
DNA repair and recombination proteins [BR:
psed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DM292_06505 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
HTH_23
HTH_29
HTH_7
GerE
Sigma70_r4_2
PAX
Motif
Other DBs
NCBI-ProteinID:
AWT09893
LinkDB
All DBs
Position
1373460..1375583
Genome browser
AA seq
707 aa
AA seq
DB search
MLDQAQRILKDVFGYDAFRGNQGAIIERVGGGGDALVLMPTGGGKSLCYQVPALLREGLA
VVVSPLIALMDDQVATLEELGVAAVALNSTLGAEEQRDIAERIRRGEIKMLYLAPERLVQ
PRMLAFLQRLDIALFAIDEAHCVSQWGHDFRPEYMQLGQLAELFPEVPRIALTATADKRT
REEIVQRLHLENAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRGDAGIVYCMSRKK
VDDLAAFLTEQGFPALPYHAGLSSDLRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVIFLKQMLNNSEGDERHKRVEQHK
LDAMLALCEETRCRRQALLAYFDEELANPCGHCDNCVDGVQTWDATEPARQALSAIYRSG
QRYGVGHLVDLLLGRDNDKVRGLGHQHLSVFGVGKALSEGEWRSLFRQLVARGLADVDLE
GFGGLRLSESCRPLLRGEVTLELRRDLSSKAPKPAASAASQLVRGEERETWEALRALRRK
LAEEHSVPPYVIFPDATLLEMLRSQPASLADMARISGVGARKLERYGEAFLEVLQGTAQA
ARSPADLRHELISLARAGMTPMQIARQLDCSEKNVYAMLAEAIGQQQLSLEQALDLPEEL
LGEIQEAFLDGEGELPPVSAVAAQFADRVPEQVLYCVRAALQVEFEL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccaggcacagcgcatcctcaaagacgtatttggctatgacgcctttcgtggc
aaccagggcgcgatcatcgagcgggtcggcggtggcggcgatgcgctggtgctgatgccg
accggcggcggcaagtcgctgtgctatcaggtcccggcgctgttgcgcgaaggcctggca
gtggtggtgtcgccattgatcgccttgatggatgatcaggtcgccacgctggaggaattg
ggtgtcgcggctgttgcgctcaactccacgcttggcgccgaggagcagcgcgacatcgcc
gagcgcatccggcgcggcgagatcaagatgctctacctggcacccgagcggctggtccag
ccgcgcatgctggcgtttctgcagcggctggatattgcgctgttcgccatcgatgaggcc
cactgcgtctcccagtgggggcacgacttccgtcccgaatacatgcagctcgggcagctt
gccgagttgtttcccgaggtgccgcgcattgccctgaccgccacggcagacaagcgtacc
cgggaagagatcgttcagcgcctgcacctggagaacgccgagcgctttctctccagtttc
gaccgcccgaacatcttctatcgcatcgtgccgaaggagcagccacgcaagcagctgctc
gcttttctcgccgagcgccgtggtgatgccggcatagtctactgcatgtcgcgcaagaag
gtcgatgatctcgccgcattcctcaccgagcagggctttcccgcgctgccttaccatgcc
gggttgtcgagcgatctgcgcgcctatcaccagaagcgcttcctcaacgaggaaggcctg
ataatggtcgcgaccatcgccttcggcatgggcatcgacaagcccaacgtgcgcttcgtc
gctcatctcgacctgcccaagtcgctcgaggcgtattaccaggagaccgggcgggcaggg
cgtgatggcctgccggcggatgcctggatggcttatggcctgcaggacgtgatctttctc
aagcaaatgctcaacaactcggaaggcgacgagcggcacaagcgcgtcgagcagcacaag
ctcgacgccatgctggcgctatgtgaggagactcgttgccgacgtcaggcgctgctggcc
tacttcgacgaagagctggccaacccatgcgggcactgcgacaactgcgtcgacggcgtg
cagacctgggacgctaccgagccggcacgccaggcgctttcggcgatctatcgcagtggc
cagcgctacggcgttggccatctggtcgacctgctgcttgggcgcgacaacgacaaggtg
cgtggcctcggtcatcagcatctatcggtgtttggcgtcggcaaggcgctgtcggagggt
gaatggcgatcgctgttccgccagctggtcgctagagggctggccgatgtcgatctggaa
gggttcggtggcctgcgcctgagcgaaagctgtcgcccgttgctccgcggcgaggtgacc
cttgagctgcgtcgcgacctgtccagcaaggcgccgaaaccggctgccagtgctgccagc
cagttggtgcgcggtgaagagcgggagacctgggaggcgctgcgcgcactgcgccgcaag
ctggccgaagagcacagcgtgccaccctatgtgatcttcccggacgccaccctgctggag
atgctgcgcagccagccggcatcgctggcggatatggcgcgtatcagtggtgtcggtgct
cgcaagctggagcgctacggcgaggcgttcctcgaagtgctgcaaggaactgcgcaggcg
gcgaggtcgccggccgacctgcggcatgagttgatcagcctggcgcgggccggcatgacg
cccatgcaaatcgcgcgtcagctggactgcagcgagaagaacgtctacgccatgctggcc
gaggcgatcgggcagcagcagttgagtcttgagcaggcactcgacctgcccgaagaactg
ctcggcgagatccaggaagccttccttgatggcgagggcgagctgccgccggtcagcgcc
gtggccgcccagttcgccgatcgtgtgccggagcaggtgctctactgcgtgcgcgccgca
ctgcaggtcgagttcgaattgtaa
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