Stutzerimonas frequens: DM292_08280
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Entry
DM292_08280 CDS
T05921
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psed
Stutzerimonas frequens
Brite
KEGG Orthology (KO) [BR:
psed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psed03032
]
DM292_08280
03400 DNA repair and recombination proteins [BR:
psed03400
]
DM292_08280
Enzymes [BR:
psed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DM292_08280
DNA replication proteins [BR:
psed03032
]
Prokaryotic type
DNA Topoisomerases
DM292_08280
DNA repair and recombination proteins [BR:
psed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DM292_08280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AWT10191
LinkDB
All DBs
Position
complement(1785747..1786847)
Genome browser
AA seq
366 aa
AA seq
DB search
MRDDSTMQEPPPLAEGDRPVPRDEAGDTGTLLCPALPPDLHYVDDSQPGIRRRTLRGKFA
YFDTDGERIRDEDEIRRINKLAIPPAYRDVWICPDPQGHLQATGRDARGRKQYRYHPRWR
EIRDSNKYDRMLEFGEALPRLRRDLEKHLALRGMPREKVMALVVLLLESTLIRIGNPRYA
KDNRSYGLTTLRTRHVDIRGTAIRFHFRGKSGVKHEVTLRDKRLARLMRRCMELPGQQLF
QYLDDEGQRRAVSSSDVNAYLQEMTGRDFTAKDYRTWAGSALALARLRQLECSPESMARH
NLVETVRQVASQLGNTPAVCRQCYIHPAILQAFSEGALAGLRGARKRRWLSAEEVGLLAF
LRSAAD
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacgacagcaccatgcaagagccccctcccctggcggagggagatcgccccgtt
cccagggacgaagcgggcgacactggcaccctcttatgccctgcgttaccaccggacctg
cactacgtagatgattcgcaacccggcatccgccgccggacgttacgtgggaagttcgcc
tacttcgatactgacggtgagcgcatccgcgacgaagacgagatacgcaggatcaacaag
ttggcgataccgcctgcgtaccgtgatgtctggatctgccccgatccgcaaggtcatctt
caagctaccggtcgcgacgcccgtgggcgcaagcagtaccgttaccacccccggtggcga
gagatccgagacagcaacaagtacgaccggatgctggagttcggcgaagcactgccacgg
ctgcgccgagacctggaaaagcacctggcgctccggggcatgccgcgcgagaaggtcatg
gcgttggtggtgctattgctcgaatccacactaatccgaatcggtaatccacgttacgcc
aaggacaaccgctcctacgggctgactaccctgcgtacccgccatgttgatatccgcggc
accgcaatccgtttccactttcgcggcaaaagcggggtcaagcacgaggtcaccctgcgc
gacaagcgcctggccaggcttatgcgccgctgcatggagctaccgggccagcagctgttt
cagtatctggatgacgaggggcaacgccgggcggtcagctccagcgatgtgaatgcctac
ctgcaggaaatgacgggccgcgacttcaccgccaaggactaccgcacctgggccggaagt
gccttggcactggcgcgtctgcgtcagctcgaatgctcccccgagagcatggcccggcac
aatctggttgagacggtaaggcaggtcgccagccagctggggaacacgcccgccgtatgt
cgacagtgctacatccatcctgcaatcctgcaggcattcagcgagggagcactggccgga
ttgcgaggtgccaggaagcgcagatggctgagcgcggaagaggttggattgctagccttt
ctcaggagcgcagcggattga
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integrated database retrieval system
