Stutzerimonas frequens: DM292_11015
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Entry
DM292_11015 CDS
T05921
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psed
Stutzerimonas frequens
Pathway
psed00071
Fatty acid degradation
psed00280
Valine, leucine and isoleucine degradation
psed00310
Lysine degradation
psed00362
Benzoate degradation
psed00380
Tryptophan metabolism
psed00410
beta-Alanine metabolism
psed00640
Propanoate metabolism
psed00650
Butanoate metabolism
psed00907
Pinene, camphor and geraniol degradation
psed00930
Caprolactam degradation
psed01100
Metabolic pathways
psed01110
Biosynthesis of secondary metabolites
psed01120
Microbial metabolism in diverse environments
psed01200
Carbon metabolism
psed01212
Fatty acid metabolism
Module
psed_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
psed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
DM292_11015 (fadB)
00650 Butanoate metabolism
DM292_11015 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
DM292_11015 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
DM292_11015 (fadB)
00310 Lysine degradation
DM292_11015 (fadB)
00380 Tryptophan metabolism
DM292_11015 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
DM292_11015 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
DM292_11015 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DM292_11015 (fadB)
00930 Caprolactam degradation
DM292_11015 (fadB)
Enzymes [BR:
psed01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
DM292_11015 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
DM292_11015 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
DM292_11015 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
DM292_11015 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AWT10678
LinkDB
All DBs
Position
complement(2403889..2406036)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNDLRQAVDAIKADASVKGVIVTS
GKDVFIVGADITEFVDNFKLPDEELVAGNLEANKIFSDFEDLGVPTVVAINGIALGGGFE
MCMAADYRVMATAAKVGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRAEDAL
KVHAVDAVVAPEKLQEAALDLVKRAISGELDYKAKRQPKLDKLKLNAIEQMMAFETTKAF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKAIEVEAAGFVKLAKTSVAQSLVGLFLSDQEL
KKKAKAYDKQARDVKLAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEGIQMGLDEASKL
LGKRVEKGRLTADKMAQALNAIRPTMSYGDFGNVDIVVEAVVENPKVKHAVLAEVEGHVR
EDAIIASNTSTISISYLAQALKRPENFCGMHFFNPVHMMPLVEVIRGEKTSETAIATTVA
YAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFARADKVMEKFGWPMGPAYL
MDVVGMDTGHHGRDVMAEGFPDRMKDDTRTAVDVMYDANRLGQKNGKGFYAYEMDKKGKP
KKVVDPEAYELLKPVVAETRELSDEDIINYMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVAMADKYADLGPLYHPTAKLREMAANGQRFYG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagagcggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaataaattcaatcgcctcactctcaacgatctg
cgccaggctgtcgacgccatcaaggccgacgcttcggtcaagggcgtgatcgtcaccagc
ggcaaggacgtgttcatcgtcggcgctgatatcaccgagttcgtcgacaacttcaagttg
cccgatgaagagctggttgccggcaacctcgaagcgaacaagatcttcagtgacttcgaa
gacctgggcgtgcccaccgtggtcgccatcaacggcatcgccctgggtggcggtttcgag
atgtgcatggccgctgactatcgcgtcatggccaccgctgccaaggtcggactgccggaa
gtcaagctgggcatctacccgggcttcggcggaaccgtgcgtctgccgcgcctgatcggt
gtggacaacgccgtcgagtggatcgcctccggcaaggaaaaccgtgccgaagacgccctt
aaggtgcacgcggtcgacgccgtcgtcgctccggagaagctccaggaagctgcactggat
ctggtcaagcgcgccatttcgggcgagctggactacaaggccaaacgccagccgaagctg
gacaagctcaagctcaatgcgatcgagcagatgatggccttcgagaccaccaaggcgttc
gtcgcagggcaggccggtccgaactatccggccccggtcgaagccatcaagaccattcag
aaagccgccaacttcggccgcgacaaagccatcgaagtcgaggctgcaggcttcgtcaag
ctggccaagacctcggttgcgcagagcctggtcggcctgttcctcagcgatcaggagctg
aagaagaaggccaaggcctacgacaagcaggcgcgcgacgtgaagctcgctgccgtactc
ggcgccggcatcatgggtggtggcatcgcctaccagtcggctgtcaaaggcacgccgatc
ctgatgaaggatatccgcgaagagggtatccagatgggcctggacgaggcctccaagctg
ctcggcaagcgtgtcgagaaaggccgtctgaccgctgacaagatggctcaggcgctcaac
gcgatccgcccgaccatgtcctatggcgatttcggcaacgtcgacatcgttgtcgaggcc
gtggtcgagaacccgaaggtcaagcacgccgtgctggccgaggtggaaggccacgttcgc
gaagacgcgatcatcgcttccaatacctccaccatctccatcagctacctggcccaggcg
ctcaagcgtccggaaaacttctgcggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaggtgatccgcggcgagaagaccagcgaaaccgccatcgccaccaccgtcgcc
tacgccaagaagatgggcaagagcccggtcgtggtcaacgattgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggattcgcccgcgccatcgctcatggtgtcgat
ttcgcccgcgccgacaaggtgatggagaagttcggctggcccatgggcccggcctacctg
atggacgtcgtcggcatggacaccggccaccacggccgcgacgtgatggccgaaggcttc
ccggatcgcatgaaggacgacacccgtaccgccgtcgatgtcatgtatgacgccaatcgc
ctcggccagaagaatggcaagggcttctacgcctacgagatggacaagaagggcaagccg
aagaaggtggtcgaccctgaggcctacgagctgctcaagccggtcgttgccgagacgcgt
gagctgtccgacgaggacatcatcaactacatgatgatcccgctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgtcgagaccgctgccgaagccgacatgggcctgatctat
ggcattggcttcccacccttccgtggtggtgcgctgcgctacatcgattcgatcggcgtc
gccgagttcgtcgcgatggccgacaagtacgccgacctgggcccgctgtaccacccgacc
gcgaagctgcgtgagatggccgccaacggccagcgcttctacggttaa
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