Stutzerimonas frequens: DM292_13475
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Entry
DM292_13475 CDS
T05921
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
psed
Stutzerimonas frequens
Pathway
psed03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DM292_13475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psed03400
]
DM292_13475
Enzymes [BR:
psed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
DM292_13475
DNA repair and recombination proteins [BR:
psed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DM292_13475
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DM292_13475
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DM292_13475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
L_thumb_ring_vir
Motif
Other DBs
NCBI-ProteinID:
AWT11130
LinkDB
All DBs
Position
complement(2897031..2898467)
Genome browser
AA seq
478 aa
AA seq
DB search
MTPSIFWYDFETTGISPSRDRPMQVAGIRTNEALEEVGEPLNLYCRLSDDILPHPAACLV
TGITPATLQQQGLSEAEFVRRLHEELAIPGTCVAGYNSLRFDDEVTRYSLYRNFYDPYAR
EWQGGNSRWDLIDLVRTAYALRPEGLVWPEEDGRVTLKLERLSAANGLEHLSAHDALSDV
RATIALARLIRQRQPRLYEYLFNLRRKQAVLDQITLLEPLVHVSGRFAAGRHFVSIVLPL
AWHPRNRNALIVCDLQAEVEPLWQESAQTLRQRLYTRREQLGEGELPVPLKLVHINKCPV
LAPLKVLRDADVRRLALDLSLCHERAALLRERRHVWVDKLAEIYAEEGFGGSDDPEQQLY
DGFLGERDRRLCEQIRGLRPAELARHPCRFEDVRLEALLFRYRARNFPEGLSVQEQSQWR
SFCQQRLSDAAHGGPNTLAQFETEIARLMPTITVAQQQLLQQWLEYGRGLGERYGLRL
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
gtgactccaagcattttctggtacgacttcgaaaccacagggatatcgcccagccgcgac
cgaccgatgcaggtggcgggtattcgcaccaacgaagcactcgaggaagttggtgagccg
ctgaatctttattgccgtctcagtgacgacatcctgccccatccggcggcgtgcctggtt
accggaatcacgccggcaacattgcagcagcaagggctaagcgaagcggagttcgttcgc
cgtctgcatgaggagctggctatcccgggtacctgtgtcgctggctacaacagcctgcgc
ttcgatgacgaggtcacacgctacagcctctatcgaaacttctatgatccttacgcgcgt
gaatggcagggcggcaacagtcgctgggatctgatcgatctggtgcgcacggcttatgcg
ctacgtcccgaagggttggtgtggccggaggaggacgggcgagtgacgctcaagctcgag
cgcttgagcgctgccaacgggctggagcatctgagcgcccatgacgcgctgtccgatgtg
cgcgccaccatcgcgctggccaggctcattcgccagcgccagccacgtctgtatgagtac
cttttcaatttgcgccgcaaacaggcagtgctggatcagatcaccctgctcgagccgctt
gtgcatgtctcggggcgcttcgccgcaggccgccacttcgtgtcgatagttctgccgttg
gcctggcatccgcgcaatcgcaatgcgctgatcgtctgcgatctgcaggccgaagtggag
ccgctctggcaggaaagtgcacagacgttgcggcagcgcctctacacgcgtcgcgagcag
cttggcgagggtgagctgccggtgcccttgaaactggtgcacatcaacaagtgtccggtg
ctggcgccgctcaaggtgctgcgcgacgccgatgtcaggcgtctggctctggatctgtcg
ctgtgtcatgagcgggcggcgctgttgcgcgagcgacggcacgtctgggtcgataagctg
gccgagatctatgccgaggaaggctttggtggcagcgacgatccggagcagcagctgtat
gacggctttctcggcgagcgagaccggcgcctgtgcgagcagatacgtgggctcaggcca
gccgaattggccaggcatccgtgccgcttcgaagatgtgcggttggaggcgttgctgttt
cgctatcgcgcccgcaactttcccgaagggttatccgtgcaggagcaatcgcagtggagg
tcgttctgtcagcagcggctgagcgatgcggcacatggcgggccgaatacgctggcgcag
tttgaaactgaaattgcgcggctgatgcccactatcaccgtggcgcagcaacaactgctg
caacaatggctcgagtatggccgagggctgggcgagcgttatggattgcgcctctga
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