Stutzerimonas frequens: DM292_15045
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Entry
DM292_15045 CDS
T05921
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psed
Stutzerimonas frequens
Brite
KEGG Orthology (KO) [BR:
psed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psed03400
]
DM292_15045
DNA repair and recombination proteins [BR:
psed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DM292_15045
Archaeal homologous recombinant proteins
DM292_15045
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
AAA_15
nSTAND3
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AWT11426
LinkDB
All DBs
Position
3220412..3224065
Genome browser
AA seq
1217 aa
AA seq
DB search
MKILAIRLKNLASLAGEQVIDFTAEPLASAGLFAITGPTGAGKSTILDALCLALFGSTPR
LDGVSPLNKVPDVEAEIGGGDERNLLRRGCGSGYAEVDFVGVDGHRYRARWEVKRAREKI
DGRLQASSQSLTDLDSGTLLASGKKREFKELLEARLGLTLAQFTRAVLLAQSEFSAFLKA
DDNERGTLLEKLTDTGLYSRLGQAAFEAAKEAKEGLARLEQQAGGLQPLEPEQRDELERE
HQAQLDALKAQQQQLKALEAQRQWLSELQRLENEREAACQLLQDAEDERDSLAEARRILD
LFEQLAPQRHRFLRLQDLGPLLDKAADSLARLQHEEQAVQQRLAELQSQCSAASEQLRSA
EQARQDAEPRLAQARREEERLQHLNADLATIREDSTRADAEVTAGAATLTQLAERQQRAA
AELAALSQQLDKSAALQPLCSAWDGYRPRLQQAVQLAARLQQGQGELPALEARAKAAQTQ
QSLAREALDALQHERGSQVGLAEQLAQLHGQLDQWRQAERETAALRELWSQQREIENSRR
ELADATTGQQAELDGLVPLGKQVRAERDAAEQALNVTLALLERQRLARSANVEALRAALV
PGEPCPVCGSQEHPWHAADTLLAGLDQQDDREAERAREALQAQDQRLQELRDRHVALNTQ
LRQSQQRQSEVEAQLQTLAPRLHALPAHAELLRQPEEMRADWLEARVATLNQQIADASRQ
QQQLLGLQQRSEALQQAWQAAREACVEATQQLERQRDALARDGQQLDAELTAFAELLPAE
RLQRWREDPAQTFMQLDADIATRLQQLQAQAELAEELRQCEQRQNDEQLQQRHRQEKQAS
CQARLAEREKLLLACRQALQTSLGEQPSASTWQQQLDLATQAARQAQVEIERQLNDGRLG
LTRLQSEQQSCRQRHAELQQERKALQVELAAWRSAHPALDDATLAQLLQMDEALLSEARQ
RLRDNAETLTRCRERLDGCLARLASHQQQQTEAPEATQLQQAHAEQLQRCEQAEQRCAET
RAALLDDDKRRRQSHALLAQIDEARAEMQRWGRIAALIGSSDGGAFRKIAQAYNLDLLVQ
HANVQLRQLARRYRLKRGGSPLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSKLRIESLFIDEGFGSLDPESLQIAMDALDSLQAQGRKVAVISHVAEMHERIPVQIQV
QRQGNGQSGLKIVGGLS
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcgccatccgcctgaaaaacctggcctcgctggccggcgagcaggtcatc
gacttcaccgcggaacccctggccagcgccgggctgttcgccatcaccgggcccaccggc
gctggcaagagcaccattctcgacgccctgtgcctggcgctgttcggcagcacgccgcgg
ctggacggcgtgtcaccgctgaacaaggtccccgacgtggaggccgaaatcggcggtggc
gacgagcgcaacctgctgcgccgcggctgcggcagcggctacgccgaggtcgacttcgtc
ggcgtcgacggccaccgctaccgcgcacgctgggaggtcaagcgcgcccgcgagaagatc
gacggccgcctgcaggccagcagccagagccttacggatctcgacagcggcacgctcctg
gcgagcggcaagaagcgtgaattcaaggaattgctcgaagcccgcctggggctgaccctg
gcccagttcacccgcgccgtgctgctggcgcaaagcgagttttccgccttcctcaaggcc
gatgacaacgagcgcggcaccctcctggaaaagctcaccgataccggcctctacagccgc
ctcggccaggccgccttcgaagccgccaaggaggcgaaggaaggcctcgcccgtctggag
cagcaggccggcggcctgcagccactggagccggagcagcgtgacgaactggagcgcgaa
catcaggctcagctcgacgcgctgaaagcgcagcagcagcagctcaaggcgttggaagcg
cagcggcaatggctcagcgaactgcagcgcctggaaaacgagcgcgaagcggcatgccag
ctactgcaggatgccgaagacgagcgcgacagcctcgccgaggcccggcgcattctcgac
ctgttcgagcaactggcgccgcagcgccatcgcttcctgcgcctgcaggatctcggcccg
ctgctggacaaggccgccgacagcttggcgcgcctgcagcatgaggaacaggccgtgcag
cagcgcctggccgagctgcagagccaatgcagcgccgccagcgagcaactgcgttcggcc
gaacaggcgcgccaggacgccgaaccgcggctggcccaggcgcgccgtgaagaggaacgc
ctgcagcatctaaacgccgacctggcaactatccgcgaggacagcacccgggccgatgcc
gaggtgactgcgggcgcagcgacgctcacgcagctcgccgagcgccagcagcgcgccgcg
gcggaacttgccgcgctgagccagcaactggacaagagcgccgcgctgcaaccgctctgc
agcgcctgggacggctatcgcccgcgtctgcaacaggccgtgcagctggcggcacgtctg
cagcaaggtcagggcgaactcccggcactggaagcgcgggccaaggccgcccaaacccag
caaagcctggctcgcgaggcgctggacgctctgcaacatgagcgcggcagccaagtcggc
ctggccgaacagctcgcccaactgcacgggcagctggaccaatggcgccaggccgagcgc
gaaaccgcggccctgcgcgagctttggtctcagcaacgcgagatcgaaaacagccgacgc
gaactggccgacgccaccaccggccagcaggcggagctggacggcctggtgccgctgggc
aagcaggttcgcgccgagcgtgacgccgccgagcaggcgctgaacgtcactctcgccttg
ctcgaacgccagcgcctggcgcgcagtgcgaatgtcgaggcgctacgcgccgcgctggtg
ccgggcgagccttgcccagtctgtggcagccaggaacatccctggcatgcggccgatacc
ctgctcgccggcctcgatcagcaggacgaccgcgaggccgaacgcgcccgcgaagcactg
caggcccaggatcagcgcctgcaggaactgcgcgaccgccacgtcgcgctgaacacccag
ttgcgccagagccagcagcgtcagagcgaggtcgaggcgcagctgcagacgctggccccg
cgtctgcacgccctgccagcgcatgccgaactgcttcgccaacccgaagaaatgcgcgcg
gactggctggaagcccgcgtggcgaccctgaaccagcagatcgccgatgccagccggcag
cagcaacaactgcttgggttgcagcagcgcagcgaagccctgcagcaggcctggcaggcc
gcgcgcgaggcctgcgtcgaagcgacccagcagctcgagcgccagcgcgatgccctcgcc
cgcgacggccagcagctcgacgcagaactgacggccttcgccgagctgctgccggccgag
cggctgcagcgctggcgcgaagatccggcgcagacctttatgcagctggacgccgacatc
gccacgcgcctgcagcagctgcaagcacaagccgagctggccgaggagctgcgccagtgc
gagcagcgccaaaacgacgaacagctgcagcagcgccatcgtcaggaaaaacaggcgagc
tgccaggcacgcctggccgaacgcgagaagctgctgctggcctgccggcaggcgctgcag
accagcctcggcgagcagcccagcgccagtacctggcagcagcaactggacctggccacc
caggccgcgcgccaggcccaggtcgaaatcgagcgccaactcaacgacggcaggctcggc
ctgacccgcttgcagagcgaacagcagagctgccgccagcgccacgccgagctgcagcag
gagcgcaaggcgctgcaggtcgaactcgccgcctggcgcagcgcccatccggcgctggac
gacgccaccctcgcccagttgctgcagatggacgaggcactgctgagcgaggcgcgccag
cgcctgcgagacaacgccgaaaccctgacccgctgtcgcgagcgactcgacggctgtctc
gcccgactggctagccatcagcagcaacagaccgaggcgcctgaagccacgcagctgcaa
caggcacacgccgaacagctgcagcgctgcgaacaggccgagcagcgctgcgccgaaacc
cgcgccgcgctgctcgacgacgacaagcgccgccgccagagccacgcgctgctggcacag
atcgacgaggcgcgcgccgaaatgcagcgctgggggcgtatcgccgcgctgatcggctcg
agcgacggcggcgccttccgcaagatcgcccaggcctacaacctcgacctgctggtgcag
cacgccaacgtgcagctgcgtcagctggcccgccgttataggctcaagcgcggcggaagt
ccgctgggcctgctggtgatggataccgagatgggcgacgagctgcgctcggtgcattcg
ctgtccggcggcgagaccttcctcgtctcgctggccctggcactgggcctggcctcgatg
gcgtcgagcaagctcaggatcgaatcgctgtttatcgacgagggcttcggcagcctcgat
cccgagtcgctgcagatcgccatggacgcgctggattcgctgcaggcccagggccgcaag
gtggcagtgatcagccacgtggccgagatgcacgaacgcatcccggtgcagattcaggtg
cagcgccagggcaacgggcagagcgggctgaagatcgtcggcgggctgtcctag
DBGET
integrated database retrieval system
