Stutzerimonas frequens: DM292_15955
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Entry
DM292_15955 CDS
T05921
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
psed
Stutzerimonas frequens
Pathway
psed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DM292_15955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psed03400
]
DM292_15955
Enzymes [BR:
psed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DM292_15955
DNA repair and recombination proteins [BR:
psed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DM292_15955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_16
AAA_30
Zn_ribbon_GTF2H2
AAA_25
Zn_Ribbon_TF
Zn_Ribbon_YjdM
TrwB_AAD_bind
AAA_22
PIF1
nSTAND_NTPase5
HypA
Motif
Other DBs
NCBI-ProteinID:
AWT12726
LinkDB
All DBs
Position
3397311..3399533
Genome browser
AA seq
740 aa
AA seq
DB search
MPSSILRLALPSPLRRLFDYLPPHGVTPDSLQPGMRLRVPFGRREVIGVLVELSDQSEVP
LEKLKPALELLDSKPPLPLPLFKLCLWTAQYYQHSLGDTLSWALPVLLRQGEPAEARLER
YWRLVEGASPDDPRLTRAPRQREALKIIAQHAHGLPHTLIGKLQLNKDSLDLLLEKGLVR
VESRRSSPARQHSGSWLLQAELTLNAQQRAAFEAVSAGLGSFRAFLLAGVTGSGKTEVYL
QLIHRVLAAGKQALVLIPEINLGPQTLARFEQRFNARIALLHSNINDRERLDAWLAARDG
EADIIIGTRSALFTPMKNPGLIIIDEEHDASYKQQEGLRYHARDLALVRARQENLPIVLG
SATPSLESLHNAHSGRYALLKLSQRAGNALQPRFLRLDVKSRPLDAGISGPLQQAIGQTL
AAGQQVLVYLNRRGFAPTLLCHDCGWLSQCPRCDARMTLHQRHNELRCHHCGHVERPPRN
CPDCGKVDLRPVGAGTERAEERLGVLFPDYPVLRIDRDSTARKGAMEKMFTTINRGEPCL
LVGTQMLAKGHHFPRVTLVAILDADGGLFSADFRASERMAQLIVQVAGRAGRAEEPGKVI
IQTHLADHPLLVQLTDQGYFAFAEQALSERRAAGLPPFSHLALLRAEAQKPGQAEAFLDE
ACTLAEQTLGQLQLSGIELLGPVPAPMERRAGRYRAQLLLQGNARAALHRLMDAWVPLLE
QLPGGRAVRWSLDVDPIDLF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
gtgccctccagcatcctccgtctggcgctgccttcgccgctgcgccgcctgttcgactac
ctgccgccacatggcgtaactcccgactcgctgcagccgggcatgcgcctgcgcgtgccg
ttcggccggcgcgaggtcatcggcgtgctggtagagctgagcgatcagagcgaagtgccg
ctggaaaaactcaagcctgcgctcgagctgctggatagcaagccgccactgccgctcccc
ctgttcaagctctgcctgtggaccgctcagtattaccagcacagcctcggagataccctg
agctgggcattgccggtgctgttgcgccagggcgaaccagccgaagcgcgcctggaacgc
tactggcgcctggtcgaaggtgccagcccggacgatccgcgactgacccgtgccccgcgt
cagcgcgaagccctgaagatcatcgcgcagcatgcccacggcctgccccacaccctgatc
ggcaagctgcagctgaacaaggacagcctcgacctgctgctggagaagggcctggtaagg
gtggagtcgcgccgcagcagcccagcgcgacagcacagtggtagctggctgctgcaggcc
gagctgacgctgaatgcgcaacagcgcgccgccttcgaagcagtcagcgccggcctcggc
agctttcgggcctttctgctggccggcgtaaccggcagcggcaagaccgaggtctatctg
cagctgatccatcgcgtgctcgcagccggcaagcaggccctggtgctgatcccggagatc
aacctcggcccacagacactggcccgcttcgagcagcgtttcaatgcgcggatcgcgctg
ctgcactccaacatcaatgatcgtgagcggctcgatgcctggctggcggcccgcgatggc
gaggcggacatcatcatcggcacccgctcggccctgttcacgccgatgaagaatcccggc
ctgatcatcatcgacgaggaacatgacgcttcctataaacagcaggaaggcctgcgctat
cacgcccgcgatctcgccctggtccgtgctcgccaggaaaatctgccgatcgtgctcggc
tcggcgacgccctcgctggagagtctgcacaacgcccacagcggccgctacgcgctgctc
aagctgagccagcgcgccggtaatgccctgcagccgcgtttcctgcgactggacgtgaag
agtcgccccctggacgccggcatatccggcccgctgcaacaggccatcggccagacgctc
gcagccgggcagcaagtactggtctacctcaaccgccgtggcttcgccccaactttgctt
tgccacgactgcggctggctcagccagtgcccgcgctgcgatgcacgcatgaccctgcac
cagcggcataacgaactgcgctgccaccactgcgggcacgtcgagcggccgccgcgcaac
tgccccgattgcggcaaggtagacctgcgtccggtcggcgccgggaccgagcgcgccgaa
gagcggctcggcgtcctgttccccgattacccagtgctgcgcatcgaccgcgacagcacg
gcgcgcaagggcgcgatggaaaaaatgttcaccaccatcaaccgtggcgagccctgcctg
ttggtcggcacccagatgctcgccaaggggcaccattttccgcgcgtcacgctggtggcg
attctcgacgccgacggcgggctgttttctgccgattttcgcgccagcgagcggatggcc
cagttgatcgtgcaggtcgccgggcgcgccggacgcgcggaggaaccgggcaaggtgatc
atccagacgcacctggccgaccacccgctgctggtgcagctgaccgaccagggctatttc
gccttcgccgagcaggcgctgtccgaacgtcgcgccgccggcctgccgcccttcagccat
ttggcattgctgcgcgccgaagcgcagaagcccggccaggccgaggccttcctcgacgaa
gcctgcacgctggcggagcagacgctcgggcagctgcagctcagcggcatcgagctgctc
ggtccggtgccggcgccgatggagcgtcgcgccgggcgctaccgggcgcagctgctgctg
cagggcaacgcccgcgcggccctgcatcgcctgatggatgcctgggtgccactgctcgag
cagctgcccggcggacgcgccgtgcgctggagcctggatgtcgacccgatcgatctgttc
tga
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