Stutzerimonas frequens: DM292_16150
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Entry
DM292_16150 CDS
T05921
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
psed
Stutzerimonas frequens
Pathway
psed00300
Lysine biosynthesis
psed00470
D-Amino acid metabolism
psed01100
Metabolic pathways
psed01110
Biosynthesis of secondary metabolites
psed01120
Microbial metabolism in diverse environments
psed01230
Biosynthesis of amino acids
Module
psed_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psed00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DM292_16150 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DM292_16150 (lysA)
Enzymes [BR:
psed01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DM292_16150 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AWT11622
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Position
3437950..3439197
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AA seq
415 aa
AA seq
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MEAFSYRDGQLFAEGVALPALAQRFGTPTYVYSRAHIEAQYRAYADALDGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGEPGRIVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQQVAAELGMKAPVSLRVNPDVDAGTHPYISTGLKENKFGIDIDNAEA
VYARAAELPNLDVVGVDCHIGSQLTSLPPFLDALDRLLALVDRLAARGIQIRHLDLGGGL
GVRYRDEQPPLAGDYIQAVRQRIEGRGLALVFEPGRSIVANAGVLLTRVEYLKHTAHKDF
AIVDAAMNDLIRPALYQAWMNVVAVQPHEGDTRRYDIVGPICETGDFLAKDRELALVEGD
LLAVCSAGAYGFVMSSNYNTRGRAAEVLVDGDQAFEVRRRESVQELYAGESLLPT
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaggccttctcgtaccgcgacggtcaactcttcgcggaaggcgtggcactgcccgca
ctcgcgcaacgcttcggcaccccgacctacgtctattcccgcgcccacatcgaagcccag
taccgggcctatgccgatgcgctggatggcatgccgcacctggtctgcttcgccgtcaaa
gccaattccaacctgggcgtgctgaacgtgctggcgcgtctcggcgccggcttcgacatc
gtttcgcgcggggaactcgagcgcgtactggcggccggtggcgagccgggtcgcatcgtc
ttctccggcgtcggcaagacccgcgacgacatgcgccgcgcgctggaagtcggcgtgcac
tgcttcaacgtcgaatccaccgacgaactggagcgcctgcagcaggttgccgccgagctg
ggcatgaaggcgccggtgtcgctgcgggtcaatccggacgtggatgccggtacccatcca
tatatctccaccggtctgaaagagaacaagttcggcatcgatatcgacaacgccgaggcg
gtctacgcccgggccgccgagctgccgaacctggacgtggtcggcgtcgactgccacatc
ggttcgcagctgaccagcctgccgcccttcctcgatgccctcgaccgcctgctggcgctg
gtcgatcggctcgccgcacgtggcatccagatccgtcacctcgacctcggtggcggcctt
ggcgtgcgttatcgcgacgagcagccgccgctggccggcgactacatccaggccgtgcgc
cagcgcatcgaaggccgcgggctggcactggtgttcgagccgggccgctccatcgtcgcc
aacgccggcgtgctgctgacccgcgtggaatacctcaagcacaccgcgcacaaggatttt
gccatcgtcgatgcggcgatgaacgacctgatccgtccggcgctgtaccaggcctggatg
aatgtggtcgcggtgcagccgcacgaaggcgatacccgtcgctacgacatcgtcgggccg
atctgcgagaccggcgatttcctcgccaaggatcgcgagctggcgctggtcgaaggcgat
ctgctggcggtgtgttcggccggcgcctacggctttgtcatgagctccaactacaacacc
cgcggccgcgccgccgaggtgctggtggatggtgaccaggccttcgaagtgcgccgtcgc
gagagcgttcaggagctgtacgccggcgaaagcctgctgcccacttga
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