KEGG   Stutzerimonas frequens: DM292_17760
Entry
DM292_17760       CDS       T05921                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
psed  Stutzerimonas frequens
Pathway
psed03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:psed00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DM292_17760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psed03400]
    DM292_17760
Enzymes [BR:psed01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     DM292_17760
DNA repair and recombination proteins [BR:psed03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     DM292_17760
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AWT11915
LinkDB
Position
complement(3788602..3789279)
AA seq 225 aa
MALPTELRQALRELAAHTEGIDLPVYQAFERDPLEPIIGLGDADAPLCFFGRDPGREEVR
HGEPFIGSGGQIVRRVLYRHLHGAEMPDFEAGRALGRHYFWINTVPYKPIGNKAWSMAVK
RRFQPLMRQLLIDSWHGRHIVTLDREAFLWFAIGQPREARQRLEAFWQREDRFTANLDID
LQDAQGHARTFTLHPLPHPSPLNQTWFKRFPALLEARLRQLDASR
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcgctgcccaccgaactccgtcaggcgctacgtgagctggctgcgcacaccgaaggc
atcgatctgccggtctaccaggcattcgaacgtgatccgctggaacccatcatcgggctt
ggcgacgctgacgcaccgctctgcttcttcggccgcgacccgggccgcgaggaggtgcgt
catggcgaacccttcattgggtccggcggacagatcgtccggcgcgtgctctatcgccac
ctgcatggcgctgaaatgccggacttcgaggcgggacgggcgctggggcggcactacttc
tggatcaacaccgtgccgtacaagcccatcggcaacaaggcctggtccatggcggtgaag
cgccgcttccagccgctgatgcgccagttgctgatcgacagctggcatggccggcatatc
gtcactctcgatcgcgaggcctttctctggttcgccatcggccagccgcgcgaagcgcgc
cagcgcctggaggcgttctggcagcgtgaggatcgctttacggccaacctcgatatcgat
ctgcaggacgcgcaaggccatgcacgaaccttcaccctgcacccgctgccgcacccctca
ccgctgaaccagacctggttcaaacgcttccccgcgttgctggaagcgcgcctgcgccag
ctcgacgctagtcgctga

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