Stutzerimonas frequens: DM292_17760
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Entry
DM292_17760 CDS
T05921
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psed
Stutzerimonas frequens
Pathway
psed03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DM292_17760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psed03400
]
DM292_17760
Enzymes [BR:
psed01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DM292_17760
DNA repair and recombination proteins [BR:
psed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DM292_17760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AWT11915
LinkDB
All DBs
Position
complement(3788602..3789279)
Genome browser
AA seq
225 aa
AA seq
DB search
MALPTELRQALRELAAHTEGIDLPVYQAFERDPLEPIIGLGDADAPLCFFGRDPGREEVR
HGEPFIGSGGQIVRRVLYRHLHGAEMPDFEAGRALGRHYFWINTVPYKPIGNKAWSMAVK
RRFQPLMRQLLIDSWHGRHIVTLDREAFLWFAIGQPREARQRLEAFWQREDRFTANLDID
LQDAQGHARTFTLHPLPHPSPLNQTWFKRFPALLEARLRQLDASR
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcccaccgaactccgtcaggcgctacgtgagctggctgcgcacaccgaaggc
atcgatctgccggtctaccaggcattcgaacgtgatccgctggaacccatcatcgggctt
ggcgacgctgacgcaccgctctgcttcttcggccgcgacccgggccgcgaggaggtgcgt
catggcgaacccttcattgggtccggcggacagatcgtccggcgcgtgctctatcgccac
ctgcatggcgctgaaatgccggacttcgaggcgggacgggcgctggggcggcactacttc
tggatcaacaccgtgccgtacaagcccatcggcaacaaggcctggtccatggcggtgaag
cgccgcttccagccgctgatgcgccagttgctgatcgacagctggcatggccggcatatc
gtcactctcgatcgcgaggcctttctctggttcgccatcggccagccgcgcgaagcgcgc
cagcgcctggaggcgttctggcagcgtgaggatcgctttacggccaacctcgatatcgat
ctgcaggacgcgcaaggccatgcacgaaccttcaccctgcacccgctgccgcacccctca
ccgctgaaccagacctggttcaaacgcttccccgcgttgctggaagcgcgcctgcgccag
ctcgacgctagtcgctga
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