KEGG   Stutzerimonas frequens: DM292_18535
Entry
DM292_18535       CDS       T05921                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
psed  Stutzerimonas frequens
Pathway
psed03030  DNA replication
psed03410  Base excision repair
psed03420  Nucleotide excision repair
psed03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psed00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DM292_18535
   03410 Base excision repair
    DM292_18535
   03420 Nucleotide excision repair
    DM292_18535
   03440 Homologous recombination
    DM292_18535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psed03032]
    DM292_18535
   03400 DNA repair and recombination proteins [BR:psed03400]
    DM292_18535
Enzymes [BR:psed01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DM292_18535
DNA replication proteins [BR:psed03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DM292_18535
DNA repair and recombination proteins [BR:psed03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DM292_18535
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DM292_18535
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: AWT12060
LinkDB
Position
complement(3950642..3953386)
AA seq 914 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRKQYPDSPFAVVFD
AKGPTFRDALFENYKSHRPPMPDDLRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLAR
QCAALGRDVVISTGDKDMAQLVCPHVTLVNTMTGSVYDIEGVKNKFGVGPELIIDFLALM
GDKVDNIPGVPGVGEKTACGLLNGIPGGLKGLYENLDQVAGLPIRGAKSLGAKLEEHRDA
AFMSYELATIKIDVPLDVQVGDLMPGEPHREALIALYRELEFKQWLDELLREAKAAGESC
EVQPEGCSIQAEAQYETLLEQADFERWLARLKAAECFAFDTETTSLDAQRAELVGVSFAV
EPGQAAYVPLRHSYMGVPQQLELDAVLGALKPLLEDPAKTKICQHGKYDINVLMHYGIEM
RGMAFDTMLESYVLDATATRHDMDSLALKYLGRGTIRFEDIAGKGAKQLTFDQIAIEQAG
PYAAEDADVTLRLHQTLLGKLEQTPSLLRVLTEIEMPLVPVLARIERNGALVDAQLLGQQ
SVELGDKLVQLEREAFDIAGEEFNLGSPKQLCAILYDKLGCPVISKTAGGQPSTAESVLA
ELAEQDYPLPKVIMQHRSLSKLKGTYTDKLPQQINPRTGRIHTSYHQAVTATGRLSSSDP
NLQNIPIRTAEGRRIRQAFVAAPGYKLLAADYSQIELRIMAHLAQDAGLLHAFQNDLDVH
RATAAEVFGVPLEQVSNDQRRSAKAINFGLIYGMSAFGLAKQIDVGRKEAQEYIDRYFAR
YPGVLAYMERTRTQAAEQGYVETLFGRRLYLPEINSKNGAMRKGAERTAINAPMQGTAAD
IIKRAMIAVDGWLQDSGLDARVILQVHDELVLEVREDLVEQVRQQICPLMSEAAQLDVPL
LVEAGVGNNWDEAH
NT seq 2745 nt   +upstreamnt  +downstreamnt
atgagccaagcccccctcgtcctggtggacggttcgtcctatctgtaccgcgcgttccac
gcgctgcctccgctgaccacctctaccggcaagccgaccggtgcggtcaagggtgtgctg
aatatgttgctgagcctgcgcaaacagtatccggacagcccgttcgccgtggttttcgac
gccaagggtccgaccttccgcgacgcgctgttcgagaattacaagtcgcaccgcccgccg
atgccggatgacctgcgcgtgcaggtcgagccgctgcatgccagcgtccgtgcactgggg
ctgccgctgctgtgcgtggaaggggtcgaggccgacgacgtcatcggcaccctggcgcga
caatgcgcggcgctgggccgtgatgtggtgatctccaccggcgacaaggacatggcccag
ctggtctgcccgcacgtcacgctggtcaacaccatgaccggcagcgtctatgacatcgag
ggcgtgaagaacaagttcggcgtcggcccggaactgatcatcgacttcctcgcgctgatg
ggcgacaaggtcgacaacattcctggtgtgccaggcgtgggcgagaagacggcatgtggc
ctgctcaacggcatcccgggcgggctcaaggggctctacgagaacctcgatcaggtcgcc
gggctgccgattcggggtgccaagtcactgggcgccaagctggaggagcatcgcgatgcc
gccttcatgtcctacgagctggcgacgatcaagatcgacgtgccgctggacgtccaggtc
ggtgacctgatgcccggggaaccgcaccgtgaggcgctgatcgccctttatcgcgagctg
gaattcaagcagtggctggacgagctgctgcgcgaggccaaggcggctggggagagctgc
gaggtgcagccagaaggctgttcgatccaggccgaggcccagtacgagacgctgctggag
caggccgatttcgagcgctggctggcgcgtctgaaggcggccgagtgctttgccttcgat
accgaaaccaccagcctcgatgcgcagcgcgccgagctggtcggcgtgtccttcgccgtg
gagccgggccaggcggcttacgtgccgctgcgccattcctacatgggcgtgccgcagcag
ctcgagctggatgccgtgctcggcgcgctcaagccgctgctggaagatccggccaagacc
aagatctgccagcacggcaaatacgacattaacgtgctgatgcactacggcatcgagatg
cgcggcatggccttcgacaccatgctcgaatcctacgtgctggacgccaccgccacccgc
cacgacatggacagcctggcgctcaagtacctcggccgcggcaccatccgcttcgaggac
attgccggcaagggcgccaagcagctgaccttcgaccagatcgcgatcgaacaggccggc
ccgtacgccgccgaggacgccgacgtcaccctgcgcctgcatcagaccctgctcggcaag
ctggagcagacgccatcgctgctcagggtgctgaccgagatcgagatgccgctggtgccg
gtgctggcgcgcatcgagcgcaacggcgcgctggtcgatgcacagctgctcggccagcag
agcgtcgagctgggcgacaagctggtgcagctggaacgcgaggccttcgacatcgctggc
gaggaattcaacctcggctcgcccaagcagctctgcgcaatcctctacgacaagctcggc
tgtccggtgatctccaagaccgccggcggccagccgtccaccgccgaaagcgtgctggct
gaactggccgagcaggattacccgctgcccaaggtgatcatgcagcaccgctccttgagc
aagctcaagggcacctacaccgacaagctgccacagcagatcaacccgcgcaccgggcgc
atacacaccagctaccaccaggcggtgaccgccaccggccggctatcctccagcgacccg
aacctgcagaacatcccgatccgcaccgccgaggggcggcgcattcgccaggccttcgtc
gcagcgccgggctacaagctgctggcggcggactactcgcagatcgagctgcgcatcatg
gcccacctggcgcaggatgccggcctcttgcacgcgttccagaacgatctggacgtgcac
cgcgccacggccgccgaggtgttcggcgtaccgctggagcaggtcagcaacgaccagcgc
cgcagcgccaaggccatcaacttcggcctgatctacggcatgagcgccttcggcctggcc
aagcagatcgacgtcggccgcaaggaggcgcaggagtacatcgaccgctatttcgcccgc
taccccggcgtgctcgcctacatggagcgcacccgcacccaggccgcggagcagggctat
gtcgagacgctgttcggtcggcggctgtacctgccggagatcaattcgaagaacggcgcc
atgcgcaagggcgccgagcgcaccgcgatcaacgcgccgatgcagggcaccgcggcggac
atcatcaagcgcgccatgatcgccgtggacggctggctgcaggacagcgggctggatgcg
cgggtgatcctgcaggtccacgatgaattggtgctggaagtgcgcgaagacctggtcgag
caggtccgtcagcagatctgcccgttgatgagcgaggcggcccagctggacgtgccgttg
ctggtcgaggccggcgtgggcaacaactgggacgaggcgcactga

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