KEGG   Stutzerimonas frequens: DM292_18680
Entry
DM292_18680       CDS       T05921                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
psed  Stutzerimonas frequens
Pathway
psed03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:psed00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DM292_18680 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psed02044]
    DM292_18680 (icmF)
Secretion system [BR:psed02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DM292_18680 (icmF)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical DUF4131 AAA_29
Other DBs
NCBI-ProteinID: AWT12088
LinkDB
Position
3982078..3985617
AA seq 1179 aa
MKTFFGKLGAVLRRTWVWSLLLVLLLAVVVWFVGPLLAVDDYRFWESSTARLLSISVLFL
GWGLAMVFASWRASARKKRDAEDQDVQEQLRRDGLIGEEQQELRHRFKQALRTLKTSSLY
RGRSEKWRSELPWYLLIGPQGSGKTSLLDFSGLDFPLNRSEQQRLTKDVSGTRYADWYFA
DHAVLIDTAGRYLTQPDAAVDGSAWETLLGLLRRRRARPLNGVLVNLPVDQLQGGSELEL
ENLARQTRQRLHEIHQRLSVDVPVYLVLSKADRILGFDEFFEQLSREESDQVLGASFRKE
QNGSDAQVVRQEFEELLRRLNSQVILRMHQERDTQRRGRILDFPHQLGQIGEHLSLFIEL
AFAGNRYQRASQLRGFYLTSAPQLREGLDPLTAGIGRQLGLASSALPTFRSGRARFINQL
LSRVIFPEAELAGLDQREVRRIDWGQRALYAGAFGCLLLIGGAWALNFSGNHERLEQLRG
IAQQLGSERKSIEAGDEALRTLKALDASYAATEVFPPKDEVSWLRRGGLYQGEAVDPTLH
EAYRRDLEKLLLPRVGRQLEAQIRANLNDREQLLGSLRAYLMLNLAERRDAAFLKDWLAA
DWSLRHPGNAVAQQGLNTHFARLLEESFAPYQLNEKLVAKARAQLRSESLAAVVYRMLRD
QARNLPDYRLNTQLGPQASLFVGGDYAIPGFYTQRGYHKLFVAQGADLVSEILRDNWVLG
EGDSLSAKDLGRLLTEMEQLYFRDYAVHWSEAIAQLNILPAASAAQGAAQLAGLTAANSP
LLQLLLEIRENTRFAGVTEATAEAGELAEAAQGAGGKLGKAAKLATAAAEQAQAALLKNI
PDTARKTLERRFAPLHQLLDENGAAGAELSASLQALDALQSQLASLAHASAPEQAAFEMA
KARMGGQRDAINQLRNSAARLPQPLGKWLGLLAEDSWSLVLSDAYHYLNQRYRNELYASY
RGALRERYPFSAHSASDVALADFREFFKAQGLADSFFERYLKPFVSGSAGQYQLRRVDGR
GLPLSEQFLAQMSRAQTIRRSFFAENPNEPLIRFKLEPYSLDSSLGRADFRFGNQQMEYR
HGPIVQTAFRWPAEADDGRTSLVVEELGGRRVGIEKNTGPWSLFRLIDLMQVDYHSGRDV
LMLKADLGGLRANYLLHAQRSPNPFDLALLRGFKLPATL
NT seq 3540 nt   +upstreamnt  +downstreamnt
atgaagacgttctttggcaagctcggcgccgtgctgcgccggacctgggtctggagcctg
ctgctggtcttgctgctggcggttgtggtgtggttcgtcgggccgctgctggcggtcgac
gactaccgcttctgggaatcctcgaccgcccgcctgctgagcatcagcgtgctgtttctc
ggctggggcctggccatggtcttcgccagctggcgcgccagcgcgcgcaagaagcgcgac
gccgaggatcaggacgttcaggaacaactgcgccgcgacggcctgatcggcgaagagcaa
caggagttgcgccatcgcttcaagcaggcgctgcgtaccctgaagacctccagcctctat
cgcgggcgcagcgagaaatggcgcagcgagctgccctggtacctgctgatcggcccgcag
ggtagcggcaagaccagcctgctggacttctccgggctggatttcccgctcaaccgcagc
gaacagcagcgcctgaccaaggatgtctccggcacccgctatgccgactggtacttcgcc
gatcatgccgtgctgatcgacaccgccggccgctacctgacccagcccgatgcagcggtc
gacggcagcgcctgggaaaccctgctcggtctgctgcgcaggcgccgcgcccgcccgctc
aacggcgtattggtcaacctgccggtggatcagctgcaaggcggcagtgaactggagctg
gagaaccttgcccgccagacccgtcagcgcctgcacgagatccatcaacgtctgagcgtg
gacgtgccggtctacctggtgctgagcaaggccgatcggattctcggtttcgacgagttc
ttcgagcagctgtcgcgggaggaaagcgaccaggtgctcggcgcgagtttccgcaaggaa
cagaatggcagcgacgcgcaggtcgtgcgccaggagttcgaggaactgctgcgccggctg
aacagccaggtgatcctgcgcatgcatcaggagcgcgatacccagcgccgtggccgcatc
ctcgacttcccccatcagttggggcagatcggcgagcatctgagcctgttcatcgaactg
gccttcgccggcaaccgttaccagcgtgccagccagctgcggggcttctacctgaccagc
gcgccgcaactgcgcgaaggtctcgacccgctcaccgccggcatcggtcgtcagctcggc
ctggccagcagtgcactgccaaccttccgcagcggccgtgcgcgcttcatcaatcagctg
ctcagccgggtgatcttcccggaagccgaactggcgggcctcgaccaacgcgaggtgcgc
cgcatcgactggggccagcgtgccctctatgccggcgccttcggctgcctgctgctgatc
ggcggcgcctgggcgctgaacttctcgggcaaccatgagcgcctggaacaactgcgcggc
atcgcccagcaactcggcagcgagcgcaagtccatcgaggcgggagacgaggcgctacgt
acgctcaaggctctggacgcgagctatgcggcgaccgaggtgttcccgccgaaagacgag
gtgtcctggctgcgccggggcggcctgtatcagggcgaggcggtcgacccgacgctgcac
gaggcctatcgccgagatctggagaaactgctgctgccacgtgttggccggcagctggaa
gcgcagattcgcgccaacctgaacgaccgcgagcaactgctcggcagcctgcgcgcctat
ctcatgctgaacctggccgaacgccgtgatgcggcgtttctcaaggactggctggccgcc
gactggtcgctgcgccatccgggcaatgccgtggcgcagcaggggctcaacacgcacttt
gcgcgcctgctggaggaatccttcgcgccgtatcagctgaacgaaaaactggtggccaag
gcccgcgcccagttgcgcagcgaatcgctggcggcagtggtgtaccgcatgctgcgcgac
caggcgcgcaaccttcccgactaccggctgaacacgcagctcggtccgcaggcgtccctg
ttcgtcggcggcgactatgcgattcccggcttctacacccagcgcggctatcacaagctg
ttcgtcgctcagggcgccgatctggtcagtgagatcctgcgcgacaactgggtgctgggc
gaaggcgacagcctcagcgccaaggacctcggccgcctgctgacggaaatggagcagctg
tatttccgcgactacgccgtgcactggagcgaagcgatcgcccagctgaacatcctgccg
gccgccagtgcggcgcagggtgccgcacagctcgccgggctcactgccgccaactcgccg
ctgctgcaactgctgctggaaatacgcgagaacacccgcttcgccggtgtgaccgaagcg
accgccgaggccggcgagctggccgaagcggcgcaaggcgccggtggcaagctcggcaag
gcggccaaactggccactgccgcggcggagcaggcccaggctgcgctcctgaagaacata
cccgacactgcacgcaagaccctggagcgccgcttcgcgccgttgcaccagctgctggat
gagaacggcgcagccggcgccgagttgagcgccagtctgcaggccctcgacgccctgcaa
tcgcagctggcctcgctggcccatgccagcgcaccggaacaggccgccttcgagatggcc
aaggcacgcatgggcggtcagcgcgacgccatcaaccagctgcgcaacagcgctgcacgg
ctgccgcagccgctgggcaaatggctgggcctgctggccgaggacagctggtcgctggtg
ctcagcgatgcctaccactacctcaaccagcgctatcgcaacgagctctatgccagctat
cgcggtgccctgcgcgagcgctatccgttcagcgcccacagcgccagcgacgtcgccctc
gccgacttccgcgagttcttcaaggcccagggcctggcggacagcttcttcgagcgctac
ctcaagcctttcgtcagcggcagcgccggccagtaccagctgcgccgagtcgatggccgc
ggcctgccgctgtccgagcagttccttgcacagatgagccgggcgcagaccattcgccgc
agcttcttcgccgagaaccccaacgagccgctgattcggttcaagctcgagccctattcg
ctggattcgagcctcggtcgcgccgacttccgcttcggcaaccagcagatggaataccgc
cacgggccgatcgtgcagaccgcgttccgctggccggccgaagccgacgacggacgcacc
agcctggtggtggaagaactcggtggccgtcgcgtgggtatcgagaagaacaccgggccc
tggtcgctgttccgcctgatcgacctgatgcaggtcgactaccacagcggccgcgacgtg
ttgatgctcaaggccgatctcggcggcctgcgcgccaactacctgctgcatgcgcagcgc
tcgccgaatccgttcgatctcgcgctgctgcgcggcttcaagctgccggcgacgctgtga

DBGET integrated database retrieval system