KEGG   Stutzerimonas frequens: DM292_19875
Entry
DM292_19875       CDS       T05921                                 
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
psed  Stutzerimonas frequens
Pathway
psed03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:psed00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    DM292_19875 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psed02044]
    DM292_19875 (clpV)
Secretion system [BR:psed02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DM292_19875 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_22 AAA_16 ClpB_D2-small nSTAND3 TniB NACHT AAA_7 Sigma54_activat ResIII Clp_N AAA_25 AAA_24 NBD_SMAX1 Mg_chelatase Relaxase_C Hpr_kinase_C DUF5947 AAA_6 ABC_tran_CTD
Other DBs
NCBI-ProteinID: AWT12310
LinkDB
Position
complement(4235090..4237681)
AA seq 863 aa
MINVDLQQLVQALDAETKRDLESAAERCVVRGGSKILVEDLLLGLLERPDGLLKRALLDA
EVDAGALAQALQPRGEHSESRNPVFSTELVQWLQDALLVASLELGQSQIDQAALILALLR
NPLRYAGSHYQPLLARLDAERLRDFALSQQPQGSTGKPAAGGESNLARFTHNFTQQARDG
KLDPVLCRDSAIRQMIDILARRRKNNPIVVGEAGVGKTAIVEGLALRIVSGEVPAALKGV
ELLCLDLGLLQAGASVKGEFERRLQGVIDEVKASSKPIILFIDEAHTLIGAGGQAGSGDA
ANLLKPALARGELRTIAATTWSEYKKYFEKDPALARRFQPVQLHEPSVSEAVTILRGLAP
VYEKSHGIYLRDDAVTAAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPEALERL
RGEVAEGERQREAMRRDLAAGLPVDAAALERLEQRLIAAGDEIEQLETRWARQRQLAERL
LELRKRTAEARSDANEDGEAPSLDELEAELRTVQAELAAAQAEQRLVSHEVCPRLVAEVI
SHWTGVPLAQLAREHNAQVANFAADLRARVRGQEQAVEALDRAMRAAAAGLNKPDAPVGV
FLLVGPSGVGKTETALALADLLYGGERFLTVINMSEFQEKHSVSRLIGAPPGYVGYGEGG
MLTEAVRQKPYSVILLDEVEKADPDVMNVFYQIFDKGVANDGEGREINFRNTLILMTSNL
ASERIASFCAAGQRPTAEDLELVIRPQLSQHFKPALLGRMRVVPYYPIAGEVLDELVILK
LARFGERLQRRQLQFSHCPALVTHLSERCGDSDSGARLIDHLIEQHLQPLVVDRLLDAMA
IGEPLQRVHATLDGDGALVCEFA
NT seq 2592 nt   +upstreamnt  +downstreamnt
atgatcaatgtcgatctgcaacaactggtacaggcgctggacgccgagaccaagcgcgat
ctggaaagcgcagccgaacgctgcgtggtacgtggcggcagcaagattctcgtcgaggac
ctgctgcttggcctgctcgagcgtcccgatggattgctcaagcgagccttgctagatgcc
gaagtggatgccggcgcactggcgcaggcgctgcaaccgcgaggcgagcacagcgagtcg
cgtaacccggtgttttccaccgaactggtgcaatggctacaggatgccctgctggtggcc
agcctggaactcggccagagccagatcgaccaggccgcactgattctcgcgctgctgcgc
aatccgctgcgctatgcaggcagtcattaccagccattgctggcccggctggatgccgag
cgcctgcgcgacttcgccctaagccagcagcctcaaggcagcactggcaaacctgccgcc
ggtggcgagtcgaacctggcgcgctttacccacaacttcacccaacaggcccgtgacggc
aagcttgatccggtgctctgccgcgactcggcgatccgccagatgatcgacatcctcgcc
cgccggcgaaagaacaatccgatcgtggtcggcgaagctggggtcggcaagaccgccatc
gtcgaaggcctggcgctgcgcatcgtcagcggggaagtgcctgcggcactgaagggcgtc
gagctgctctgcctggacctcggcctgctacaagccggtgccagcgtgaagggcgaattc
gaacgccgtctgcagggcgtgatcgacgaggtgaaggcctcatccaagccgatcatcctg
tttatcgacgaggcgcataccctgatcggcgccggcggccaggccggcagcggcgatgcg
gccaacctgctcaagccggcactggcacgcggcgagctgcgcaccatcgctgcaacgacc
tggagcgagtacaagaagtacttcgagaaggacccggccctggcccgacgtttccagccg
gtgcaactgcacgagccgagcgtttcggaagccgtcaccatcctgcgcgggctggcgccg
gtctacgaaaaaagtcatggcatctacctgcgcgatgatgcggtcacggccgccgccgag
ctgtcggcacgctacctggccggccggcagctgccggacaaggccgtcgacgtgctggat
accgcctgcgcgcgggtgcgcatcagcctcgccgccgcgcccgaggcgctggaacgcctg
cgtggtgaggtcgccgaaggcgagcgccagcgtgaagccatgcgccgcgatctggcggcc
ggcctgccggtcgacgcggccgccctagagcggctggagcagcgcctgatcgcggcgggg
gacgagatcgagcagctggaaacccgctgggccaggcagcgccagctcgccgagcgcctg
ctcgagctgcgcaagcgcaccgccgaagcccgcagcgatgcaaacgaggatggcgaggcc
ccatcgctcgatgagctggaggccgagctgcgcaccgtgcaggccgaactcgccgcagcc
caggccgagcagcgactggtcagccatgaggtctgcccgcgcctggtggcggaggtaatc
agccactggaccggcgtgccgctggcgcagctggcccgggagcacaacgcgcaggtcgcc
aatttcgccgccgatctgcgcgcccgggtgcgcggtcaggaacaggccgtggaagcgctg
gatcgtgccatgcgcgcggcagcggccgggctgaacaaacccgacgctccggtgggcgtg
ttcctgctggtcggccccagcggcgtcggcaagaccgaaaccgccctcgccctggccgac
ctgctgtacggcggcgagcgcttcctcactgtgataaacatgtccgagttccaggagaaa
cacagcgtttcccgcctgatcggcgcgcctccaggctatgtcggctacggcgaaggcggc
atgctcaccgaagcggtgcggcagaaaccctactcggtgattctgctcgacgaggtggag
aaggccgatccggatgtgatgaacgtcttctatcagatcttcgacaagggcgtggcgaat
gacggcgaaggccgcgagatcaacttccgcaacaccctgatcctgatgaccagcaacctt
gccagcgagcgcatcgccagtttctgcgcggccgggcagcggccgacggccgaggatctg
gaactggtcatccgcccgcagctgtcgcagcacttcaagccggccctgctcgggcgcatg
cgcgtggtgccctactacccgatcgccggcgaggtgctcgacgaactggtcatactcaag
ctggcacgcttcggtgagcgactgcagcgtcgccagctgcagttcagccactgcccggcg
ctggtcacgcacctctccgagcgctgcggcgacagcgacagcggtgcgcgcctgatcgac
catctgatcgagcagcacctgcaaccactggtggtggaccgcctgctcgatgccatggcc
atcggcgagccgctgcagcgggtgcatgccacgctggatggcgacggcgcgctggtctgt
gagttcgcctga

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