KEGG   Stutzerimonas frequens: DM292_20230
Entry
DM292_20230       CDS       T05921                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K11384  two-component system, NtrC family, response regulator AlgB
Organism
psed  Stutzerimonas frequens
Pathway
psed02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psed00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DM292_20230
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:psed02022]
    DM292_20230
Two-component system [BR:psed02022]
 NtrC family
  KinB-AlgB (alginate production)
   DM292_20230
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 cREC_REC AAA Mg_chelatase AAA_16 AAA_2 AAA_22 HTH_17 VpsR Xre-like-HTH nSTAND3 HTH_23 MCM AAA_19 IstB_IS21 Tnp_22_trimer HTH_psq HTH_28 DUF815 HTH_29 HTH_50
Other DBs
NCBI-ProteinID: AWT12376
LinkDB
Position
complement(4306911..4308257)
AA seq 448 aa
MDQTTDNGGRILLVDDEAAILRTFRYCLEDRGYTVMTAASAAQAEAILQRQVFDLCFLDL
RLGEDNGLDVLQQMRMLAPWMRVVIVTAHSAVDTAVDAMQAGAADYLLKPCSPEQLRLSA
AKQLEVRQMAARLEALEGEMKQRSDALGSHSPAMMAVLETARQVADTDANILILGESGTG
KGELARAIHTWSRRSKKAFVTINCPSLSADLMESELFGHNRGAFTGATESTLGRVNQADG
GTLFLDEIGDFPLALQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVREGKF
REDLLYRLNVITLNLPPMRERPEDVLALAERFLASFVKNYGRPARGFSDAAIAALKTYRW
PGNVRELRNVVERASIICPQQMIEVSHLGLGEQVASNAPRIGEPLSLEALEKAHIAGVLS
TSDTLEQAARILGIDASTLYRKRKQYGL
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggaccaaacgacggacaacggcgggcgcatccttctggtggatgacgaagcggcgatc
ctgcgtaccttccgttactgtctggaggatcgcggctataccgtaatgaccgccgccagc
gccgcgcaggcagaagccatcctgcagcgccaggtattcgatctctgttttctggacctg
cgcctgggcgaggacaacggcctcgatgtgctgcagcagatgcgcatgctcgcgccctgg
atgcgggtcgtgatcgtcaccgcccattcggccgtggacaccgcggtcgacgccatgcag
gccggcgctgcggactacctgctcaagccgtgcagccccgagcagctgcgcctgtccgca
gccaagcagctggaagtccggcagatggcggcgcgcctggaggccctagaaggcgagatg
aagcagcgcagcgatgcgctcggctcgcacagcccggcgatgatggcggtgctggaaacc
gcacgccaggtcgccgacaccgacgccaatatcctcatcctcggcgagtccggtaccggc
aagggcgaactggcgcgtgccatccacacctggagccggcgctcgaagaaggccttcgtc
accatcaactgcccctcgctgtcggcggacctgatggaaagcgaactgttcggccacaac
cgcggcgcgttcaccggcgccaccgaaagcaccctgggccgggtcaaccaggccgatggc
ggcacgctgttcctcgacgagatcggcgacttcccgctggcgctgcagcccaagctgctg
cgcttcatccaggacaaggagtacgagcgcgtcggcgacccggtgacccgccgcgccgat
gtgcgcatcctcgccgcgaccaatctcaacctcgaggagatggtgcgcgagggcaagttc
cgcgaggacctgctctaccgcctaaacgtcatcaccctcaacctgccccccatgcgtgag
cgtccggaagacgtgctggccctggccgaacgcttccttgcttccttcgtcaagaactac
gggcggccggcccgcggcttcagcgatgccgcgattgccgcgctgaagacctaccgctgg
ccgggcaacgtgcgggaactgcgcaacgtggtggaacgcgccagcatcatctgtccgcag
cagatgatcgaagtgagccacctgggcctcggcgagcaggttgccagcaacgccccgcgc
atcggtgagccgctgagcctggaagccctggaaaaggcccatatcgccggcgtgctgagc
accagtgataccctcgagcaggccgcgcgcatcctcggcatcgacgcgtcgacgctgtac
agaaaacgcaagcagtacggcctatga

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