Stutzerimonas frequens: DM292_20330
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Entry
DM292_20330 CDS
T05921
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
psed
Stutzerimonas frequens
Pathway
psed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DM292_20330 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psed03400
]
DM292_20330 (recC)
Enzymes [BR:
psed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DM292_20330 (recC)
DNA repair and recombination proteins [BR:
psed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DM292_20330 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AWT12396
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All DBs
Position
4332671..4336081
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AA seq
1136 aa
AA seq
DB search
MLSLYHAPDLETLGELAITMLAQPLADPFAPARVVVPSQGMGRWLTLELARRQGIAMQLE
LQLPAAFVWDLSRTVLGSLPEQSAFSPTTLAWRLYGWLCEPANLELAPRLAQYLDGGDER
RRLSLAAKIADVFDQYLLYRDDWLAAWERGETLDLGPDEAWQALLWRELTKDGHPHRARL
LGDLLQRLYRDEPLPDLPERLLVFGISSLPPHHLRVLDGLARHIDVVVCALNPSREAWGE
IRDIRELARQLPSSGRLGSVASEEQARQNPARERSVQAVHEHPELGFNEASSSAVAPQPS
GADDWYLDVGHPLLASLGKQGRDFFDSLFSLTASEGSQEFGLYSDDEDLHDDSLLHALQN
DILRLRTRLPDERITLAENDRSLEVHIAHSPLREVEILHDQLLARFAADPTLTPDQVVVL
TPDIERYAPFIEAVFAPREGSPRIPYSLADRSLRAEVPLIESFLELLLLAQSRFAAEEIL
AWLEQPAIARRAGIESEDLPLLRDWLREAGVRWGRDGEQRARLGLPAEPAFTWRQGLDRL
LLGFAAPPQLAGDRAPLLGEHWPLDALEGARGQLLGRLVDFVERLGSLADQLARPRPLAE
WADDLQVLIDTLFDEREAGDTLLLLSQTCAALRDQAQAADLSRPIELELVHQQLSAALQQ
GGGASGFLTGAVTFCTMVPMRSLPFRVVCLLGLDDGAFPRRTPPSGFDLIGRHPRRGDRA
RRLDDRYLLLETLLSARQALYLSYVGRDPRDNAVLPPSVLLSEVLEAVDMTAVLADGARP
VSQKILIAHPLQPFSPRNFGEAPCAGYSLPWFRAAQRLAEPPQAQAQPFASLLAEPDEAW
LTIEPSQLLQCFRHPARFLLEQRLGLRLADDQESLASDEPFDLEMPAWNGLRRLSLQAME
QGWSDEEERRMACAAGWLPTGELGQALWGKLRGPVRAFAPRLFELRPDAVPEPLPVDITL
AGVRIHGWLDGVTPGGLFGWKLGRLGEWDLPPFWLRHLLLNLCATPGIERHSLMLSPAGD
WQLGPLANAAELLEPWLVAYRSAIREPLALLPRSSQAFARGYRKPSRGSEPLDCARKRAR
EAWLGAEFSPIAAEAEDPWSALAFRDRDPLDERFETLAEQLIGPALDALADEEQEE
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcctctaccacgcccctgatctcgaaaccctcggcgaactggccatcacgatg
ctcgcccagccgctggccgaccccttcgcgccggcgcgggtggtggtgccgagccagggc
atgggccgctggctgaccctggagctggcgcgccggcagggcatcgccatgcagctggag
ttgcagctaccggctgcgttcgtctgggacctgagccgcacggtgctgggcagcctgccc
gagcagtcggcgttctccccgaccaccctggcctggcgtctgtatggctggctgtgcgag
ccggccaatctcgagctggcgccgcgcctggcgcagtacctggacggtggcgacgagcgc
cgtcggctatcactggcggcgaagatcgccgacgttttcgaccagtacttgctctatcgc
gacgactggctggcggcctgggagcgtggcgaaaccctcgacctcggtcccgacgaagcc
tggcaggcgctgctctggcgcgaactgaccaaggacggccacccgcaccgcgcgcgcctg
ctcggcgacctgctgcagcgcctctatcgcgacgagccgctgccggacctccccgagcgc
ctgctggtgttcggcatcagcagcctgccgccgcaccatctgcgcgtgctcgacggcctg
gcgcggcatatcgacgtggtggtctgcgcgctcaacccgagccgcgaggcctggggcgag
attcgcgatatccgcgaactggcacggcagcttccttcttccgggcggctggggagcgtc
gcgagcgaagagcaggcgaggcaaaacccggcgagggagcggagtgtacaggccgtacat
gagcatcccgagctgggttttaacgaagcctcctcgagcgcagtagctccccagccgtcc
ggcgccgatgactggtatctggatgtgggccatccgctgctggccagtctcggcaagcag
ggccgcgactttttcgactcgctgttcagcctgaccgccagcgaaggcagtcaggaattc
ggcctctattccgacgacgaggacctgcacgacgacagcctgctgcatgccttgcagaac
gacatcctgcgcctgcgcacccgcctgcccgatgagcgcatcaccctggccgagaacgac
cgttcgctggaggtgcatatcgcccactcgccgctgcgcgaggtggaaatcctccatgac
cagctgctggcgcgcttcgccgccgacccgacgctgacgccggatcaggtggtggtgctg
acccccgacatcgaacgttatgcgcccttcatcgaggcggtgttcgccccgcgcgagggc
agcccgcggattccctacagcctcgccgaccgcagcctgcgcgccgaggtgccgttgatc
gagtccttcctcgaactgctgttgctggcgcagagccgtttcgccgccgaggaaatcctc
gcctggctggaacagccggccatcgcccgccgcgccggcatcgaaagcgaagacctgccg
ctgctgcgtgactggctgcgcgaggccggcgtgcgctggggccgcgatggcgagcagcgc
gcacggctgggcctgccggccgagccggcctttacctggcgccaggggctggaccgcctg
ctgctgggcttcgctgcaccgccgcagctggccggcgaccgtgcgcccttgcttggcgag
cactggccgctggacgcgctggaaggcgcgcgcgggcagttgctcgggcgattggtggac
ttcgtcgagcgactcggcagcctggccgatcaactggctcggccgcgcccgctggccgag
tgggcggatgacctgcaagtgctgatcgatacgctgttcgacgagcgtgaagccggtgac
accttgcttttgttgtcccagacctgcgccgccctgcgcgatcaggcccaggccgccgac
ctcagccggcccatcgagctggagctggtgcaccagcagctcagcgccgcgttgcagcag
ggcggcggcgcctcgggctttctcaccggtgcggtgaccttctgcaccatggtgccgatg
cgcagcctgccgttccgcgtggtctgcctgctcggcctggacgacggcgccttcccgcgg
cgcacgccgccgtcgggcttcgatttgatcggccggcatccgcgccgtggcgaccgggcg
cggcgcctcgacgaccgctacctgctgctggagacgctgctctcggcgcgccaggcgctg
tacctgtcctatgtcggccgcgacccgcgggacaacgccgtgctgccgccctcggtgctg
ctcagcgaggtgctcgaggcggtggacatgaccgccgtgctggccgacggggcgcggccg
gtcagccagaagatcctcatcgcgcatccgctgcagccattctcgccgcgtaatttcggc
gaagcgccctgtgccggctattcgctgccctggttccgcgccgcccagcgcctggccgag
ccaccacaggcgcaggcgcaacccttcgccagcctgctcgccgaacccgatgaggcctgg
ctgaccatcgagccgtcgcagctgctgcagtgcttccgccacccggcgcgcttcctgctc
gaacagcgcctcggcctgcgcctggccgatgatcaggaatcgcttgccagcgacgaaccg
ttcgacctggagatgccggcctggaacggcctgcgccgcctgtcgctgcaagcgatggag
cagggctggagcgacgaggaggagcgacgcatggcctgcgcggcgggctggctgcccacc
ggcgagctgggccaggcgctgtggggcaaactgcgcggaccggtgcgtgcctttgcaccg
cggctgttcgaactgcgcccggacgctgtgcccgagccgctgccggtggacatcaccctg
gccggcgtgcgcatccatggctggctcgatggcgtgacgccgggcgggctgttcggctgg
aagctcggccgcctcggcgaatgggacctgccgccgttctggctgcgccacctgctgctc
aacctgtgcgccacgcccggcatcgagcgccacagcctgatgctttcgccggccggtgac
tggcagctggggccgctggccaatgccgccgagctgctggagccctggctggtggcctac
cgcagcgcgatccgcgagccgctggcgctgttgccgcgcagcagccaggcgttcgcccgc
ggctaccgcaagccgagccgcggcagcgagccgctggactgcgcccgcaagcgcgcccgc
gaagcctggctcggcgccgagttcagccccattgccgccgaagccgaagacccctggagc
gccttggccttccgcgatcgcgatccgctggacgagcgtttcgaaaccctggccgaacag
ctgatcggcccagccctggatgccctggctgatgaggagcaggaagaatga
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