KEGG   Stutzerimonas frequens: DM292_20995
Entry
DM292_20995       CDS       T05921                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
psed  Stutzerimonas frequens
Pathway
psed03030  DNA replication
psed03430  Mismatch repair
psed03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psed00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DM292_20995
   03430 Mismatch repair
    DM292_20995
   03440 Homologous recombination
    DM292_20995
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psed03032]
    DM292_20995
   03400 DNA repair and recombination proteins [BR:psed03400]
    DM292_20995
Enzymes [BR:psed01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DM292_20995
DNA replication proteins [BR:psed03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DM292_20995
DNA repair and recombination proteins [BR:psed03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DM292_20995
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C RNase_H_2
Other DBs
NCBI-ProteinID: AWT12521
LinkDB
Position
complement(4483967..4484674)
AA seq 235 aa
MSMFWFNPRGPKLSLEQQQRVAELQRPSPPKAVPLREQRLVVLDLETTGLHLKRDLVIAI
GAVVIENGAIAYSQQFECTLCRQVKVNESVLIHGIAPSELASGLPPAEALLSFMEFAGDS
VILAFHSPFDQRMLARALKQELGYNLEHSFLDVADLAPMLFPEAMIHRGGLDHWLGYFNI
HIPQRHNAAADAMATAEIALILLNRAQRTGLQRFDELAQRLRCWQRARKAAFNSI
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagtatgttctggttcaacccacgcgggccgaaactatccctggagcagcaacagcgc
gttgccgagctgcagcggccttctcctcccaaagccgtgcctctgcgcgagcaacggctg
gtcgtcctggatctggagaccactggcttgcatctcaagcgcgacctggtgatcgccatc
ggcgcagtggtaatcgagaacggcgccatcgcctattcccagcagttcgaatgcacgctc
tgccgccaggtcaaggtaaacgaaagcgtactgatccatggcatcgcgcccagcgaactg
gccagcggcctgccgccggcggaggctttgctgagcttcatggagttcgccggcgacagc
gtcatcctggcctttcactccccgttcgatcagcgcatgctggcccgcgcgttgaaacag
gagcttggctataacctggaacacagctttctcgatgtagccgatctggcgcccatgctg
tttccggaagcgatgattcatcgcggcgggctggaccactggctcggttacttcaacatc
cacattccgcaacgccacaatgccgcagccgacgccatggctacagctgagatcgccctg
atcctgctgaatcgtgcgcagcgcaccggactccagcgtttcgacgaactggctcagcgg
ctcagatgctggcagcgcgcacgcaaggcggcgttcaactcgatctga

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