Stutzerimonas frequens: DM292_21260
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Entry
DM292_21260 CDS
T05921
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
psed
Stutzerimonas frequens
Pathway
psed00900
Terpenoid backbone biosynthesis
psed01100
Metabolic pathways
psed01110
Biosynthesis of secondary metabolites
Module
psed_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
psed00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
DM292_21260
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
psed01006
]
DM292_21260
Enzymes [BR:
psed01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
DM292_21260
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
DM292_21260
2.5.1.29 geranylgeranyl diphosphate synthase
DM292_21260
Prenyltransferases [BR:
psed01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
DM292_21260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AWT12572
LinkDB
All DBs
Position
complement(4547894..4548787)
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AA seq
297 aa
AA seq
DB search
MQTPNTSLPLPSCDSLLRLRRQVDERLALRLPFPESELDTVTLALREGTLAPGKRLRPLL
LLLALGDLGSDPTIGLDPACALEMIHAASLFLDDMPCMDNASLRRGQPTLHLRFGEDVAV
LASVALLSHAYGITATAPGLTPRQRNEAVAILARAVGAQGLVRGQFRDLHGAQQQAHPLD
AATTTNQLKTGSLFSAALTLAGLLVGADRTLMRHLHGFAVELGLAFQLLDDIADGLSPEQ
TGKDCQQDRAKATVVSLLGPQAARQQLATHREAALAHLQAAGLAEGELASLMRQLLG
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgccgaataccagcctcccgctcccgtcatgcgacagcctgctgcgcctgcgc
cggcaagtcgacgagcgcctggcgctgcgcctgccgtttcccgaatcggagctggacacg
gtcacgctcgcgcttcgcgagggcaccctggcacccggcaagcgcttgcgcccgctcttg
ctcctgctggcgctcggcgacctgggcagcgacccgaccatcggcctggatccggcctgt
gcgctggagatgatccacgccgcgtcgctgtttctcgacgacatgccctgcatggataac
gccagcctgcgccgcggccagccgaccctgcacctgcgtttcggcgaagacgtcgccgta
ctcgcctcggtggccctgctcagccacgcctacggcatcaccgccaccgctccgggcctg
acgcccagacagcgcaacgaagcggtcgccatcctggctcgcgccgtcggtgcgcagggc
ctggtgcgagggcagttccgcgacctgcacggtgcgcagcaacaggctcacccactcgat
gcagccaccaccaccaaccaattgaagaccggctccctgtttagcgctgcgctgaccctg
gccgggctgctggtcggggccgatcgaacgctgatgcggcatcttcacggtttcgccgtc
gaactgggcctggctttccagctgctcgacgacatcgccgacggcctcagccccgagcag
accggcaaggattgccagcaggatcgggccaaggccacggtggtctcgctgctcggtccg
caggccgcgcgccagcaactggcgacgcaccgcgaagcggcactggcgcacctgcaggcc
gccgggctggccgaaggcgagctcgcctcgctgatgcgccagctgctcggctag
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