Pseudonocardia sp. EC080625-04: FRP1_00260
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Entry
FRP1_00260 CDS
T04054
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
psee
Pseudonocardia sp. EC080625-04
Pathway
psee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FRP1_00260 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psee03019
]
FRP1_00260 (groEL)
03110 Chaperones and folding catalysts [BR:
psee03110
]
FRP1_00260 (groEL)
03029 Mitochondrial biogenesis [BR:
psee03029
]
FRP1_00260 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psee04147
]
FRP1_00260 (groEL)
Enzymes [BR:
psee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FRP1_00260 (groEL)
Messenger RNA biogenesis [BR:
psee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FRP1_00260 (groEL)
Chaperones and folding catalysts [BR:
psee03110
]
Heat shock proteins
HSP60 / Chaperonin
FRP1_00260 (groEL)
Mitochondrial biogenesis [BR:
psee03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FRP1_00260 (groEL)
Exosome [BR:
psee04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FRP1_00260 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
FRP1_00260 (groEL)
Exosomal proteins of breast cancer cells
FRP1_00260 (groEL)
Exosomal proteins of colorectal cancer cells
FRP1_00260 (groEL)
Exosomal proteins of bladder cancer cells
FRP1_00260 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Rv2466c-like
DUF4844
Motif
Other DBs
NCBI-ProteinID:
ALE71967
LinkDB
All DBs
Position
complement(54636..56264)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKQIAFDEEARRGLERGMNTLADAVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDSWEKIGAELVKEVAKKTDDIAGDGTTTATVLAQALVREGLRNVAAGANPMSLKRGIE
KATEAVSQALLKSAKEVETKEQIAATASISAADKQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISPYFVTDAERMEVELEDPYILLVSSKISTVKDLLPLLEKIMQ
SGKPLAIISEDVEGEALATLVVNKIRGTFKSVAVKAPGFGDRREAMLADMAILTGGEVIS
EKVGLKLDNADVSLLGTARKVVVTKDETTIVDGAGDNEQIAGRVNQIRAEIERTDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GAGLFEGLGLDGDEATGANIVKVALEAPLKQIAVNAGLEGGVVAEKVRNLPTGEGLDAAT
GEYKDLVAAGIIDPAKVTRSALQNAASIAALFLTTEAVIADKPEKGGGAPADPTGGMGGM
DF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcagatcgcgttcgacgaggaggcccgccgcggcctcgagcgagggatgaac
accctcgcggacgccgtcaaggtgacgctcggcccgcgcggccgcaacgtcgtcctggag
aagaagtggggcgcgcccaccatcaccaacgatggtgtgtcgatcgccaaggagatcgag
ctcgaggactcctgggagaagatcggcgccgagctggtgaaggaggtcgccaagaagacc
gacgacatcgccggcgacggcaccaccaccgccaccgtgctggcccaggcgctggtccgt
gagggcctgcgcaacgtggccgccggcgcgaacccgatgtcgctcaagcgcggcatcgag
aaggccaccgaggccgtctcccaggcgctgctgaagagcgccaaggaggtcgagaccaag
gagcagatcgcggccaccgcgtcgatctccgccgccgacaagcagatcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggaaggcgtcatcacggtcgaggagtcgcagacc
ttcgggctcgagctcgagctcaccgagggcatgcgcttcgacaagggctacatctcgccc
tacttcgtgaccgacgccgagcggatggaggtcgagctcgaggacccgtacatcctcctc
gtctcgtccaagatctccacggtcaaggacctgctgccgctgctcgagaagatcatgcag
tcgggtaagccgctggcgatcatctcggaggacgtcgagggcgaggccctggccaccctg
gtcgtcaacaagatccgtggcaccttcaagtccgtcgccgtcaaggcccccggcttcggt
gaccgtcgtgaggccatgctcgccgacatggcgatcctgaccggcggcgaggtcatctcg
gagaaggtcggcctcaagctcgacaacgccgacgtctccctgctgggcaccgcccgcaag
gtcgtcgtcaccaaggacgagaccaccatcgtcgacggtgccggtgacaacgagcagatc
gccggccgggtcaaccagatccgcgccgagatcgagcgcaccgactccgactacgaccgc
gagaagctccaggagcgtctcgccaagctggccggcggcgtcgccgtcatcaaggccggc
gcggcgaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggcggccgtcgaggagggcatcgtcgccggcggcggcgtcgccctgatccaggcc
ggtgccggcctgttcgagggtctcggcctggacggtgacgaggccaccggcgcgaacatc
gtcaaggtcgcgctggaggccccgctcaagcagatcgcggtcaacgccggcctcgagggc
ggcgtcgtggcggagaaggtccgtaacctgccgaccggtgagggcctcgacgccgccacc
ggcgagtacaaggacctcgtcgccgcgggcatcatcgacccggcgaaggtgacccgctcg
gcgctgcagaacgcggcctcgatcgcggccctgttcctcaccaccgaggcggtcatcgcc
gacaagccggagaagggcggcggcgcccccgccgacccgaccggcggcatgggcggcatg
gacttctga
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