Pseudonocardia sp. EC080625-04: FRP1_03280
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Entry
FRP1_03280 CDS
T04054
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psee
Pseudonocardia sp. EC080625-04
Pathway
psee00260
Glycine, serine and threonine metabolism
psee00460
Cyanoamino acid metabolism
psee00630
Glyoxylate and dicarboxylate metabolism
psee00670
One carbon pool by folate
psee00680
Methane metabolism
psee01100
Metabolic pathways
psee01110
Biosynthesis of secondary metabolites
psee01120
Microbial metabolism in diverse environments
psee01200
Carbon metabolism
psee01230
Biosynthesis of amino acids
psee01240
Biosynthesis of cofactors
psee04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
psee00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FRP1_03280
09102 Energy metabolism
00680 Methane metabolism
FRP1_03280
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FRP1_03280
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FRP1_03280
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FRP1_03280
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FRP1_03280
Enzymes [BR:
psee01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FRP1_03280
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Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ALE72389
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Position
718615..719898
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AA seq
427 aa
AA seq
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MSEQTFWGPDFSALQQQDPEIAGVVLDELDRLRGGLQLIASENLTSPAVLAALGSTLSNK
YAEGYPGRRYYGGCSVVDEAENIGNARAKELFGAEHVNLQPHSGASANLAAYAAFAKPGD
TVLAMDLKQGGHLTHGSKVNFSGLWFNAVSYLVREDTEAIDYDQVRSLAREHRPKIIIAG
ATAYPRLIDFKIFREIADEVGAVLMVDAAHFIGLVAGQAIPSPVPYADVVTATTHKVLRG
PRGGMVLCKAEHAKAIDKAVFPFSQGGPLMHAVAAKAVAMREAAQPEYQAYARQVVSNAQ
ALAKSLESEGMRAVSGGTDNHLALMDLRPIGVTGSEAETRCDRAGITLNKNAIPYDPAPP
MKPSGIRVGSPSVTTQGMTEADMAEVGALLARAVKAEHDTTAGDKELGAVAEAVTALVRK
APAYPRG
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgagcagaccttctggggcccggacttctccgcactgcagcagcaggatcccgag
atcgcgggagtcgtgctggacgagctggaccgcctgcgtggcggcctccagctcatcgcg
agcgagaacctgaccagcccggccgtgctggcggcgctcgggtcgacactgtccaacaag
tacgccgagggctatcccggccgccgctactacggcggctgcagcgtcgtcgacgaggcc
gagaacatcggcaacgcgcgcgccaaggagctcttcggcgccgagcacgtgaacctgcag
ccgcactccggtgcgagcgcgaacctcgccgcgtacgccgccttcgccaagccgggcgac
accgtgctggcgatggacctcaagcagggcggtcacctgacgcacggcagcaaggtgaac
ttctccggcctgtggttcaacgcggtctcctacctggtgcgtgaggacaccgaggccatc
gactacgaccaggtccgcagcctggcccgcgagcaccgaccgaagatcatcatcgccggt
gcgaccgcctacccgcgcctgatcgacttcaagatcttccgcgagatcgccgacgaggtc
ggtgccgtgctgatggtcgacgcggcgcacttcatcggcctggtcgccggccaggcgatc
ccgtcgccggtgccctacgccgacgtcgtcaccgctaccacgcacaaggtgctgcgcggg
ccgcgcggcggcatggtgctgtgcaaggccgagcacgccaaggccatcgacaaggcggtg
ttccccttctcccagggcggcccgctgatgcacgcggtcgcggcgaaggccgtcgcgatg
cgggaggcggcccagcccgagtaccaggcctacgcccgccaggtcgtctcgaacgcccag
gcgctcgccaagagcctggagtccgagggcatgcgcgcggtgtccggtggcaccgacaac
cacctggcgctgatggacctgcggccgatcggagtgaccgggtccgaggccgagacccgc
tgcgaccgggccggcatcacgctgaacaagaacgccatcccctacgacccggccccgccg
atgaagccgtccggcatccgggtcggctcgccgagcgtcacgacccaggggatgacggag
gcggacatggccgaggtcggcgccctgctggcccgtgcggtgaaggccgagcacgacacc
acggcgggcgacaaggaactcggtgccgtcgccgaggcggtcaccgcactggtccggaag
gcacccgcctaccctcgggggtga
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