Pseudonocardia sp. EC080625-04: FRP1_03400
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Entry
FRP1_03400 CDS
T04054
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
psee
Pseudonocardia sp. EC080625-04
Brite
KEGG Orthology (KO) [BR:
psee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psee03000
]
FRP1_03400
Transcription factors [BR:
psee03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FRP1_03400
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
Motif
Other DBs
NCBI-ProteinID:
ALE75971
LinkDB
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Position
complement(744411..745277)
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AA seq
288 aa
AA seq
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MRAFVALADQGSVRGAAARLVVTESTVSAAVRALAEEVGVPLVERDGRGVRLTPAGHRYA
GYARRVLGLLEEGAAAARGEADPEHGRVRLAAVTTAGEHLLPDLLAGFRDRHPGVTLEVD
VAPSDRVWPMLAHHEVDVAVAGRPPAAATGPGASGPPLVRAVRENTLVVVGAQAAEHDPA
RATWLLREPGSGTRATQEALLADLGVDPPRLLLGSHGATVAAARAGLGITLVSRDAVRRF
LADGELTELAVPGTPLDRPWHVVTHPDATASTALLLAHVLATAPWHAR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgttcgtcgcgctcgccgaccagggctcggtgcgcggcgccgcggcccggctg
gtggtcaccgagtccacggtgtccgcggcggtgcgggcgctcgccgaggaggtgggcgtc
ccgctcgtcgagcgcgacggccgcggggtccgcctgaccccggccgggcaccgctacgcc
ggttacgcccgacgggtgctcggcctgctcgaggagggcgccgcggccgcccggggcgag
gccgaccccgagcacggcagggtccggctggccgcggtcaccaccgcgggcgagcacctc
ctgccggacctgctcgccgggttccgggaccggcacccgggcgtcacgctggaggtcgac
gtcgcccccagcgaccgggtgtggccgatgctcgcgcaccacgaggtcgacgtcgccgtc
gccggtcgtccgcccgccgccgcgaccgggccgggggcgtccggtccacccctggtgcgg
gccgtgcgggagaacacgctggtcgtcgtgggtgcgcaggccgccgagcacgatccggcg
cgtgcgacgtggctgctgcgcgagccgggctccggtacccgggccacccaggaggcgctg
ctcgccgacctcggtgtggacccgccgcggctcctgctgggctcgcacggcgcgaccgtc
gccgccgcccgcgcggggctcgggatcaccctcgtctcacgtgacgcggtgcgccggttc
ctcgccgacggggagctgaccgagctcgcggtgcccggcacaccgctggaccggccgtgg
cacgtggtgacccatcccgacgcgacggcgagcaccgcgctgctgctcgcgcacgtcctc
gccaccgccccgtggcacgcccgctga
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