Pseudonocardia sp. EC080625-04: FRP1_03625
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Entry
FRP1_03625 CDS
T04054
Name
(GenBank) glycogen debranching protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
psee
Pseudonocardia sp. EC080625-04
Pathway
psee00500
Starch and sucrose metabolism
psee01100
Metabolic pathways
psee01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
psee00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
FRP1_03625
Enzymes [BR:
psee01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
FRP1_03625
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
GlgX_C
Motif
Other DBs
NCBI-ProteinID:
ALE72435
LinkDB
All DBs
Position
complement(792202..794211)
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AA seq
669 aa
AA seq
DB search
MPVFPLGAHPDDHGTRFAVASTSAETVEVCLVDGVDGALTERRVELREHTFGVWHGHVPG
VKPGQRYGFRAHGPYRPFDGLRANPHKILVDPYATRVTGTVTDVVAARGWHGDPMSGRPS
TVDSLGSVPLSVVTAPERGSRPARPDVPWSDTVISEIHVKGWTKLHPEVPEAHRGTYLGL
AHPAVIAQLQRTGITAVELLPVQASAPEPPLLERGAANYWGYATLGFLAPHPGYAAVPGN
ETAEFRYLVDTLHAAGIEVILDIVPNHTCEGGVGGTTLSYRGLDAPAYYSLGGSGHDADI
TGTGNTLDAGSPTVIRLVCDAMRHWVHAYGVDGFRIDLASVLGRPRSGPFSPDSALLTAI
AQDPTLSTCKLIAEPWDATGEGYRVGGFGVAWSEWNGRYRDAVRDFWRGHGGVAELASRL
TGSSDIYALSGRRPWASVNFVTAHDGFTLRDLVSYERKHNEGNGENNRDGTDDNRSQNLG
AEGETDDAGIRTARLSTARAMMATLLLSIGTPMITGGDERWRTQGGNNNPYCRDDETSWV
DWTGTDETAAMETFTAKVAALRRESPVLHRDQFYVDGEVLWWDPSGRPMEPEDWHDGGRR
TLVVLLADYWLLLLHAGDEPVDCLLPDGHDLDPVLDSTTPDGEPADPAPLLAGSTVVLPP
RSVRLLRSR
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgtcttcccgctcggtgcccaccccgacgaccacgggacccgcttcgcggtcgcc
tccaccagcgcagagacggtcgaggtctgcctggtcgacggcgtcgacggcgccctgacc
gagagacgggtcgagctgcgcgagcacaccttcggcgtgtggcacgggcacgtccccggg
gtgaaacccggccagcgctacggcttccgcgcgcacggcccctaccgcccgttcgacggg
ctgcgcgccaacccgcacaagatcctcgtcgacccgtacgcgacacgggtcaccggcacc
gtcaccgacgtcgtcgccgcccgcgggtggcacggcgacccgatgtccggacggccgagc
acggtcgactcgctgggcagcgtcccgctgtcggtggtcaccgcccccgagcggggatcc
cgcccggcgcggccggacgtgccgtggtccgacacggtgatctcggagatccacgtcaag
ggctggacgaagctccacccggaggtcccggaggcgcaccgcggcacctacctcgggctg
gcgcacccggccgtcatcgcgcagctgcagcggaccgggatcaccgccgtcgagctgctg
ccggtgcaggcgagcgcgccggagccgccgctgctggagcggggcgcggcgaactactgg
ggctacgccaccctcgggttcctcgctccgcaccccggatacgcggccgtgcccggcaac
gagaccgccgagttccgctacctggtcgacaccctgcacgcggccgggatcgaggtgatc
ctggacatcgtccccaaccacacctgcgagggcggggtcggcgggacgacgctgtcctac
cgcgggctggacgccccggcgtactactcgctgggcggttccgggcacgacgccgacatc
accggcaccggcaacaccctcgacgccgggtcgccgacggtcatccggctggtctgcgat
gcgatgcggcactgggtgcacgcctacggcgtcgacggcttccggatcgacctcgcctcg
gtgctcggccgcccgcgctccggcccgttctcccccgactcggcactgctcaccgcgatc
gcgcaggacccgacgctgtcgacctgcaagctgatcgccgagccgtgggacgcgaccggt
gagggctaccgggtcggcggcttcggcgtcgcctggtcggagtggaacggccgctaccgc
gacgccgtgcgcgacttctggcgcggccacggcggcgtcgccgagctggcgtcgcggctg
accggcagctccgacatctacgcgctgtcggggcgccgcccgtgggcgtcggtcaacttc
gtcaccgcgcacgacggcttcaccctgcgcgatctcgtctcctacgagcgcaagcacaac
gagggcaacggcgagaacaaccgcgacggcaccgacgacaaccgctcgcagaacctcggt
gcggaaggcgagaccgacgacgccggcatccgcaccgcccggctctcgacggcgcgcgcg
atgatggcgaccctgctgctgtcgatcggcaccccgatgatcaccggcggcgacgagcgc
tggcgcacccagggcgggaacaacaacccgtactgccgcgacgacgagacgtcgtgggtg
gactggaccggcaccgacgagaccgccgcgatggagaccttcaccgcgaaggtcgccgcg
ctgcgccgggagtcgccggtgctgcaccgcgaccagttctacgtcgacggtgaggtcctc
tggtgggacccgtccgggcggccgatggagcccgaggactggcacgacggcgggcggcgg
accctcgtggtgctgctcgccgactactggctgctgctcctgcacgccggtgacgagccc
gtggactgcctcctgccggacgggcacgacctcgatccggtcctcgactcgaccacgccc
gacggcgaaccggccgacccggccccgctcctggccggatcgaccgtcgtgctcccgccg
cgctcggtgcgcctgctgcggagccgctga
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