Pseudonocardia sp. EC080625-04: FRP1_04615
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Entry
FRP1_04615 CDS
T04054
Name
(GenBank) LuxR family transcriptional regulator
KO
K07693
two-component system, NarL family, response regulator DesR
Organism
psee
Pseudonocardia sp. EC080625-04
Pathway
psee02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psee00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FRP1_04615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
psee02022
]
FRP1_04615
Two-component system [BR:
psee02022
]
NarL family
DesK-DesR (membrane lipid fluidity regulation)
FRP1_04615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_40
Sigma70_r4
HTH_23
HTH_24
HTH_29
DprA_WH
HTH_20
HTH_IclR
HTH_Tnp_ISL3
HTH_38
HTH_7
HTH_AsnC-type
HTH_28
HTH_5
HTH_68
HTH_11
LexA_DNA_bind
DUF3489
DUF2089
Motif
Other DBs
NCBI-ProteinID:
ALE72572
LinkDB
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Position
complement(1002924..1003529)
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AA seq
201 aa
AA seq
DB search
MTRLLVADDEHLIRDAIIGLLDLEDDFDIVGRAASGDEALATALALRPDIAMLDLQLPGP
DGIEVARRLATQLPQCRCIIVTSHARPGYLKAALAAGVCGFLPKTTSSHTLAEVVRTVAG
GGRYVDPELAAEAISAGDSPLTPRESDVLALARDGAPIDEIARRVSLSPGTVRNHLAAVI
TKLGTTNRHEAVQAAARRGWI
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcctgctcgtcgccgacgacgaacacctcatccgcgacgccatcatcgggctc
ctcgacctcgaggacgacttcgacatcgtgggccgcgcggcctccggagacgaggcactg
gccaccgcgctggcgctccggcccgacatcgcgatgctcgacctgcagctgcccggcccc
gacggcatcgaggtggcacgccgcctcgccacgcagctgccgcagtgccgctgcatcatc
gtgacctcgcacgcccggcccggatatctgaaggccgcgctggccgccggcgtgtgcggg
ttcctgcccaagaccacgtcctcgcacacactcgccgaggtcgtacgcacggtcgccggt
ggggggcgctacgtcgatccggagctggccgccgaggcgatcagcgccggcgactccccg
ctgaccccgcgcgagtccgacgtcctcgccctggcccgcgacggggcacccatcgacgag
atcgcccggagggtgtcgctgtcaccgggcaccgtccgcaaccacctcgccgcggtcatc
accaaactcgggaccaccaaccggcacgaggccgtccaggccgccgcccgccgcggctgg
atctag
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