Pseudonocardia sp. EC080625-04: FRP1_06560
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Entry
FRP1_06560 CDS
T04054
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
psee
Pseudonocardia sp. EC080625-04
Pathway
psee02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psee00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FRP1_06560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psee02000
]
FRP1_06560
Transporters [BR:
psee02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FRP1_06560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ALE72854
LinkDB
All DBs
Position
1393297..1394931
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AA seq
544 aa
AA seq
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MRPPPGRALLTCLAALLLPCVVACAPVAGADPAAAAPASTPDTIVYGHQQEPPCVYGGWI
EQAYLSGQILDNVVALDDDGRVVPWLAESWRVDPDGLTWRFTLRDGPTFSDGTPVDADAV
ARNFDHWVDGGNSTVQAWIGSYFDSADALDDRTVAVRLTRPYPRFAENMTQPYFGIQSPR
ALETRSEEENCTAPIGSGPFVVDRWNRGSDIQLLRRDDYDWAPANAEHTGPAHVRRIDWR
FIADPTARTAALRSGEIDAMYDVQAFEWRNLEAEGFELHRYVTGGRPQQISFNTERGPFT
DQRVRQAFALSLDRRGAVEAVGKGVIPYEGNGPVSRATPGYDERAAARYDHDPAAAAALL
DDAGWLPGPDGVRERDGRPLEVVFPYAVNRTINQDGAAIIQALQQQAEAVGFRVRLVPYP
PSAAAAGAYSGPGDYDLMIGYWTAVNAGILHVNWRRDLPDSPNKANSAFYDDPALEQLIV
RANSEQDPAAQAGLYRSAQQYIADRALSIGVYDRLSTLAVRPGLHGVRQEKSQGGPIFHD
AHVD
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
gtgagaccgccacccggccgcgccctgctcacctgcctggccgccctgctcctcccgtgc
gtggtcgcctgcgcacccgtcgccggggccgatcccgcggccgccgcgccggcgtccaca
ccggacacgatcgtctacgggcaccagcaggagccgccctgcgtgtacggcggctggatc
gagcaggcctacctgtccggccagatcctggacaacgtggtcgccctcgacgacgacggc
cgggtcgtcccctggctggccgagtcgtggcgggtcgacccggacgggctgacctggcgg
ttcaccctccgcgacggcccgacgttcagcgacggcacccccgtcgacgccgacgcggtc
gcccgcaacttcgaccactgggtcgacggcggcaactccaccgtgcaggcctggatcggc
tcctacttcgactccgccgacgccctcgacgaccgcacggtcgcggtgcggctcacccgg
ccctacccgcgcttcgccgagaacatgacccagccgtacttcgggatccagtccccgcgt
gcgctggagacccgctcggaggaggagaactgcaccgcgccgatcggctcgggcccgttc
gtcgtggaccggtggaaccgcggcagcgacatccagctgctccggcgcgacgactacgac
tgggccccggcgaacgccgagcacaccggtcccgcccacgtgcggcggatcgactggcgg
ttcatcgccgacccgacggcccgcaccgctgcgctgcgctccggcgagatcgacgccatg
tacgacgtgcaggccttcgagtggcgcaacctggaggccgagggcttcgagctgcaccgc
tacgtgaccggcggccgtccacagcagatcagcttcaacaccgagcgcggccccttcacc
gaccagcgggtccgccaggcgttcgcgctgagcctggaccgccgcggtgccgtcgaggcc
gtcggcaagggcgtcatcccgtacgagggcaacggcccggtcagccgggccacccccggc
tacgacgagcgggccgccgcccggtacgaccacgacccggccgcggctgcggcgctgctc
gacgacgccggttggctcccgggccccgacggcgtccgggagcgcgacggccgcccgctc
gaggtcgtcttcccgtacgcggtcaaccggacgatcaaccaggacggcgcggcgatcatc
caggcgctgcagcagcaggccgaggccgtcggcttccgggtccgcctcgtcccgtacccg
cccagcgcggccgccgccggtgcgtactcgggcccgggcgactacgacctgatgatcggc
tactggaccgcggtgaacgccggcatcctgcacgtcaactggcgtcgtgacctgccggac
tcgccgaacaaggcgaactccgccttctacgacgaccccgccctggagcagctgatcgtc
cgggcgaactccgagcaggacccggccgcccaggccggtctctaccgctcggcacagcaa
tacatcgccgaccgcgcgctgtccatcggggtctacgaccggctgagcaccctcgccgtg
cggcccggtctccacggtgtgcgccaggagaagtcccagggagggccgatcttccatgac
gctcacgtcgactga
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