Pseudonocardia sp. EC080625-04: FRP1_08815
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Entry
FRP1_08815 CDS
T04054
Name
(GenBank) hypothetical protein
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
psee
Pseudonocardia sp. EC080625-04
Brite
KEGG Orthology (KO) [BR:
psee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psee03000
]
FRP1_08815
03036 Chromosome and associated proteins [BR:
psee03036
]
FRP1_08815
Transcription factors [BR:
psee03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FRP1_08815
Chromosome and associated proteins [BR:
psee03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
FRP1_08815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_AsnC-type
P22_Cro
HTH_24
UxuA
Motif
Other DBs
NCBI-ProteinID:
ALE73167
LinkDB
All DBs
Position
1883015..1883905
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AA seq
296 aa
AA seq
DB search
MYDRDRLATLSAVVEEGSFEAAAELMSITPSAVSQRIKALERQTRQVLVRRSRPCVPTEA
GRTLLRLARQVAVLEGEVSRSFGDDAGGGVHLPIAVNADSLTHWFLHAVVPLAQRHGMRL
DLHVDDEEHTAELLREGAVVGAVTTSATPVQGCAVRPIGATRYRPVAARPVYDRWFAGRD
PAEAFPVAPRVDFGPKDRLQTRFVRRLTHRPCTGPAHRVPAADGYHDAVRAGLGWGMFTD
APARAAADAGRLVLLDRERHLDVPLYWQHWKLSTEVLDALTAAVQEVSARTLVPPS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaccgggaccggctcgcgacgctcagcgccgtcgtcgaggagggcagcttcgag
gcggccgccgagctgatgtcgatcacgccgtccgcggtgtcgcaacggatcaaggcgctg
gagcgccagacccgccaggtcctggtgcgacggtcgcgcccgtgcgtccccacggaggcg
ggccgcaccctcctgcggctcgcccggcaggtcgcggtgctggagggcgaggtgtcccgg
tcgttcggcgacgacgcaggcgggggcgtgcacctcccgatcgcggtgaacgccgactcg
ctcacgcactggttcctgcacgccgtggtgcccctcgcgcagcgccacggcatgcggctc
gacctgcacgtcgacgacgaggagcacaccgcggagctcctgcgggagggcgcggtcgtc
ggggcggtgacgacgtcggcgaccccggtccagggctgcgcggtccgtccgatcggtgcc
acccggtaccgcccggtcgccgcccgcccggtctacgaccggtggttcgccgggcgcgac
ccggccgaggcgttcccggttgcgccgcgtgtcgacttcggtccgaaggaccggctgcag
acccgcttcgtgcgccggctgacccatcgcccgtgcaccgggccggcgcaccgggtgccg
gccgccgacggctaccacgacgccgtgcgggccggcctgggctggggcatgttcaccgac
gccccggcgcgggcggccgccgacgccggacgcctcgtcctgctcgaccgggaacgccat
ctcgacgtgccgctctactggcagcactggaagctgagcaccgaggtgctcgacgccctg
acggccgcggtgcaggaggtgtcggcgcggacactcgtgccgccgtcgtga
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