Pseudonocardia sp. EC080625-04: FRP1_08985
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Entry
FRP1_08985 CDS
T04054
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psee
Pseudonocardia sp. EC080625-04
Pathway
psee03030
DNA replication
psee03410
Base excision repair
psee03420
Nucleotide excision repair
psee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FRP1_08985
03410 Base excision repair
FRP1_08985
03420 Nucleotide excision repair
FRP1_08985
03440 Homologous recombination
FRP1_08985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psee03032
]
FRP1_08985
03400 DNA repair and recombination proteins [BR:
psee03400
]
FRP1_08985
Enzymes [BR:
psee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FRP1_08985
DNA replication proteins [BR:
psee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FRP1_08985
DNA repair and recombination proteins [BR:
psee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FRP1_08985
NER (nucleotide excision repair)
GGR (global genome repair) factors
FRP1_08985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
HHH_2
ERp29_N
Motif
Other DBs
NCBI-ProteinID:
ALE76144
LinkDB
All DBs
Position
1920531..1923254
Genome browser
AA seq
907 aa
AA seq
DB search
MLLDGHSLAYRAFFALPAENFRTGTGQTTNAVYGFTSMLINLLRDEEPTHLAVAFDVSRK
TFRSERFADYKANRTTTPDDFRGQIDLIKEVLGALNIPVFAVDGFEADDLIATLATQAEG
QGFQVLITTGDRDAFQLVTEDVTVLYPKRGVSDLGRIDPAEVDKRYGLTPTQYPDFAALR
GDPSDNLPSIPGVGEKTAAKWVREFGSLAELTDRVDEVKGKAGDNLRANLANVLLNRQLT
ELVRDVDLGAGPEQLEVRAWDRDAVHRLFDELEFRVLRERLFSTLSSAEPEAEEGFEISA
EVVEPGSVRSWLDAHARDGRRIALSFAGVAGPVAGRDVAGIALAVGEPTVEQRAAGATAG
VPRAGYLGLAGLTPDDEAALGDWLADADVPKAAHDVKAVLHALRSRGWSLAGLTSDTALA
AYLARPGQRTFDLADLALRYLRRELRTEEPADGQLSLLGGADEADAQAAQQEMLAASAIA
ELADALDTELAERGGTELLADLELPLAFVLADCEAAGIAVDSETLSDLESDFGGQVREAA
QNAYRVIGKEINLGSPKQLQVVLFDELEMPKTKRTKTGYTTDADALQSLYEQTGHEFLQF
LLQHRDATRLKVTVDGLIKSVADDGRIHTTYSQTIAATGRLSSTDPNLQNVPIRTAAGRR
IRDAFVVGTGPEGGAYAELMTADYSQIEMRIMAHLSEDEALIEAFRSQHDFHAETAARVF
GVEAAGVSVEQRAKIKAMNYGLAYGLSAYGLSGQLRISTDEAKGLMDDYFAGFGGVRDYL
AGVVDQARKDGYTATILGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIIKVAMLG
VRRALSAEGLRSRMLLQVHDELVLEVADGERETCEALVRREMAAAADLSVPLEVSVGYGR
SWDAAAH
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
ctgctgctcgacggtcactccctggcctaccgggcgttcttcgcgttgcccgcggagaac
ttccgcaccggcaccgggcagaccacgaacgcggtctacggcttcacctcgatgctgatc
aacctgctgcgcgacgaggagccgacgcacctggcggtggcgttcgacgtctcccggaag
acgttccgctccgagcggttcgccgactacaaggcgaaccggacgaccacgccggacgac
ttccgcggccagatcgacctcatcaaggaggtcctgggtgcgctgaacatcccggtgttc
gcggtcgacggcttcgaggccgacgacctcatcgccaccctcgcgacgcaggccgagggc
cagggcttccaggtgctcatcaccaccggcgaccgggacgcgttccagctggtcaccgag
gacgtcacggtgctctacccgaagcgcggcgtgtccgacctgggccggatcgacccggcc
gaggtcgacaagcgctacgggctgaccccgacccagtaccccgacttcgcggcgttgcgc
ggcgacccgtcggacaacctgccctcgatcccgggggtcggtgagaagacggcggcgaag
tgggtccgcgagttcggctcgctcgccgagctgaccgaccgggtcgacgaggtgaagggc
aaggcaggcgacaacctgcgggccaacctggccaacgtgctgctgaaccggcagctcacc
gagctggtccgcgacgtcgacctcggtgcgggcccggagcagctcgaggtgcgcgcctgg
gaccgcgacgcggtgcaccgcctgttcgacgagctcgagttccgggtgctgcgcgagcgc
ctgttctccacgctgtcgtcggccgagccggaggccgaggagggcttcgagatctccgcg
gaggtcgtcgagccggggtcggtgcggtcctggctcgacgcccacgcccgcgacgggcgg
cggatcgcgctgagcttcgccggggtcgccgggccggtcgcgggccgcgacgtcgcgggg
atcgcgctggcggtcggggagccgacggtcgagcagcgcgcggccggggcgacggcgggc
gtcccccgggccggctacctcggtctcgccggtctcaccccggacgacgaggccgcactc
ggcgactggctcgccgacgccgacgtgcccaaggccgcgcacgacgtgaaggccgtcctg
cacgcgctgcggtcccgcggctggtcgctggccgggctgaccagcgacaccgcgctcgcc
gcgtacctggcgcggccggggcagcggaccttcgacctggccgacctggcactgcgctac
ctgcgccgcgagctgcgcaccgaggagccggccgacgggcagctgtccctgctcggcggg
gccgacgaggcggacgcgcaggccgcgcagcaggagatgttggccgcgtcggcgatcgcc
gagctggccgacgccctcgacaccgagctcgccgagcggggcggcaccgagctcctcgcc
gacctggagctcccgctggcgttcgtcctcgccgactgcgaggcggccgggatcgcggtc
gactccgagacgctctcggacctggagtccgacttcggcggccaggtccgcgaggccgcg
cagaacgcgtaccgggtgatcggcaaggagatcaacctcgggtcgccgaagcagctccag
gtggtgctgttcgacgagctggagatgccgaagaccaagcgcaccaagaccggctacacc
accgacgcggacgcgctgcagagcctctacgagcagaccggtcacgagttcctgcagttc
ctgctgcagcaccgggacgcgacccggctgaaggtcaccgtcgacgggctgatcaagtcc
gtcgccgacgacggccgcatccacaccacctactcgcagacgatcgcggcgaccggccgg
ctctcgtcgaccgacccgaacctgcagaacgtgccgatccgcaccgcggccggccgccgc
atccgggacgcgttcgtcgtcgggaccgggccggagggcggggcctacgcggagctgatg
accgcggactacagccagatcgagatgcggatcatggcgcacctgtccgaggacgaggcg
ctgatcgaggccttccgctcgcagcacgacttccacgccgagaccgcggcccgggtgttc
ggcgtcgaggcggccggggtgtcggtcgagcagcgcgccaagatcaaggcgatgaactac
ggcctggcctacgggttgtcggcctacggcctgtccgggcagctgcggatctccaccgac
gaggccaagggcctgatggacgactacttcgccgggttcggcggggtgcgcgactacctg
gcgggcgtcgtcgaccaggcccgcaaggacggctacaccgcgaccatcctcggccgtcgc
cgctacctgcccgacctgaccagcgacaaccgccagcgccgggagatggccgagcggatg
gcgctcaacgcgccgatccagggcagtgccgcggacatcatcaaggtggcgatgctcggg
gtgcgccgggcactgtcggccgagggactgcggagccggatgctgctgcaggtccacgac
gagctcgtgctcgaggtggccgacggcgagcgcgagacctgcgaggcgctggtccggcgg
gagatggcggccgccgccgacctctcggtgccgctcgaggtgtcggtcggctacggccgc
agctgggacgccgccgcgcactga
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