Pseudonocardia sp. EC080625-04: FRP1_14180
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Entry
FRP1_14180 CDS
T04054
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
psee
Pseudonocardia sp. EC080625-04
Pathway
psee02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psee00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FRP1_14180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psee03021
]
FRP1_14180
Transcription machinery [BR:
psee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FRP1_14180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ALE73899
LinkDB
All DBs
Position
3065832..3067241
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AA seq
469 aa
AA seq
DB search
MAAADSAARTDSTIEPTSGTAPRSRRTSAAGTTGAATAKKPAARTRKPGTATKAAPGTGP
KKPAAKKASTKKADGEDAELEDGDVEIEDGELEEADIEADIAEAAQEVDAEDASDDDEDD
DTNTGKNRVAPTTRSSQQKSADFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVA
LLNAEEEVELAKRIEAGLYGAERIRKLFESNDKLSPQMRRDLRWIVRDGERAKNHLLEAN
LRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAM
ADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYARE
PISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLATLSEREAGVVRLRF
GLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccgcagactccgcagcacgcaccgactcgaccatcgagccgacgtcgggcacc
gcaccccgcagccgccgcacctccgcggccggcacgaccggggcggcgaccgccaagaag
ccggccgcacgcacccgcaagccgggcaccgcgacgaaggccgcacccggcaccggcccg
aagaagccggccgccaagaaggcctccacgaagaaggccgacggcgaggacgccgaactc
gaggacggcgacgtcgagatcgaggacggcgagctcgaggaagccgacatcgaggccgac
atcgccgaggcggcccaggaggtcgacgccgaggacgcgtccgacgacgacgaggacgac
gacaccaacaccggcaagaaccgggtcgccccgaccacccggtcgtcgcagcagaagtcg
gccgacttcgtctgggacgaggaggagtccgaggcgctgcggcaggcccgcaaggacgcc
gagctcaccgcctccgccgactcggtccgcgcctacctcaagcagatcggcaaggtggcg
ctgctcaacgccgaggaggaggtcgagctcgccaagcggatcgaggccggcctctacggc
gcggagcgcatccgcaagctcttcgagtcgaacgacaagctctccccgcagatgcggcgc
gacctgcgctggatcgtccgcgacggcgagcgcgcgaagaaccacctgctggaggcgaac
ctccggctcgtggtgtcgctggccaagcgctacaccggccgtgggatggcgttcctggac
ctgatccaggagggcaacctgggcctgatccgcgcggtcgagaagttcgactacaccaag
ggctacaagttctcgacgtacgcgacgtggtggatccggcaggccatcacccgcgcgatg
gccgaccaggcccgcaccatccgtatcccggtgcacatggtcgaggtcatcaacaagctc
ggccgtatacagcgtgagctgctccaggacctcgggcgcgagcccactcccgaggagctc
gccaaggagatggacatcaccccggagaaggtgctggagatccagcagtacgcccgggag
cccatctcgctggaccagaccatcggtgacgagggcgactcgcagctcggtgacttcatc
gaggactccgaggcggtcgtcgcggtcgacgcggtgtccttcacgctgctgcaggaccag
ctccagtcggtgctggcgacgctgtccgagcgcgaggcgggcgtcgtccggctgcggttc
gggctgaccgacggccagccgcgcaccctcgacgagatcggccaggtctacggcgtgacc
cgcgagcggatccgccagatcgagtcgaagacgatgtcgaagctgcggcacccgagccgt
tcccaggtcctgcgcgactacctggactga
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