Pseudonocardia sp. EC080625-04: FRP1_15065
Help
Entry
FRP1_15065 CDS
T04054
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
psee
Pseudonocardia sp. EC080625-04
Brite
KEGG Orthology (KO) [BR:
psee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psee03016
]
FRP1_15065
Enzymes [BR:
psee01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FRP1_15065
Transfer RNA biogenesis [BR:
psee03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FRP1_15065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ALE74011
LinkDB
All DBs
Position
3255653..3256825
Genome browser
AA seq
390 aa
AA seq
DB search
MLRPADGLPPVTATAEALAGVAEAFAAGTGPVAVDAERASGFRYSQRAYLVQLRRAGAGS
ALVDPIPLRGELGPLAAALGGPEWVLHAASQDLPCLGELDLRPASLFDTELAGRLAGLPR
VGLGPMVENLLGLSLEKGHGAADWSRRPLPEDWLVYAALDVEVLIELRDVLTGLLDEQGK
LEWARQEFEAVRTAPPPAPRAEPWRRTSGIHKVRRPRPLAAVRELWQARDSLAAERDIAP
GRVLPDAAIVDAAVRNPESAQTLAGLPVFRGRSQRRLAGYWFDALRRAADLPDAELPRGS
ATTDGPPPVARWADRDPDAAARLTAARAALAGVSEQHDVPVENLLQPDLLRRLCWTPPSG
GDVRGALAAGGARPWQVELLAPLLEPVLGA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
ctgctgcgtccggccgacggtctgccgccggtcacggcgacggccgaggccctcgcgggg
gtcgccgaggcgttcgccgcgggcaccggaccggtcgcggtggacgccgagcgcgcgtcc
ggcttccgctactcgcagcgcgcctacctggtgcagctgcgacgggcgggggccggttcg
gcgctggtggacccgatccccctgcgcggcgagctcgggccgctcgccgcggcgctcggc
ggccccgagtgggtgctgcacgcggcgtcccaggacctgccgtgcctgggtgagctggac
ctgcgtccggcctcgctcttcgacaccgagctcgccgggcgcctggccgggctcccgcgg
gtcgggctcggcccgatggtggagaacctcctcggcctctccctggagaaggggcacggc
gccgccgactggtcccggcgtcccctccccgaggactggctggtctacgccgcgctcgac
gtcgaggtcctcatcgagctgcgcgacgtgctgaccgggctgctcgacgagcagggcaag
ctggagtgggcccgccaggagttcgaggccgtgcggaccgcgccaccgcccgccccgcgc
gccgagccgtggcgccgcacctccggcatccacaaggtccgcaggccccgcccgctggcc
gcggtgcgcgagctgtggcaggcccgcgactcgctggccgccgagcgcgacatcgccccg
ggccgggtgctgcccgacgcggccatcgtcgacgcggccgtccggaacccggagtcggcg
cagacgctggccgggctgccggtcttccgcggacgctcgcagcgccggctggccggctac
tggttcgacgcgctccgccgggccgccgacctccccgacgccgagttgccgcgcggctcg
gccaccaccgacgggccccctccggtggcccgctgggccgaccgggacccggacgcggcc
gcgcgcctcaccgccgcacgggcggcgctcgccggggtctccgagcagcacgacgtcccg
gtggagaacctgttgcagcccgacctgctgcgccggctgtgctggaccccgccgtccggc
ggcgacgtccgcggcgcgctggcggcgggcggtgcccgaccgtggcaggtcgagctgctc
gcccccctgctggagccggtgctgggcgcctga
DBGET
integrated database retrieval system
