Pseudonocardia sp. EC080625-04: FRP1_18380
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Entry
FRP1_18380 CDS
T04054
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psee
Pseudonocardia sp. EC080625-04
Brite
KEGG Orthology (KO) [BR:
psee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psee03016
]
FRP1_18380 (truB)
Enzymes [BR:
psee01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FRP1_18380 (truB)
Transfer RNA biogenesis [BR:
psee03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FRP1_18380 (truB)
Prokaryotic type
FRP1_18380 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
NAD_binding_3
LPP
Motif
Other DBs
NCBI-ProteinID:
ALE74454
LinkDB
All DBs
Position
complement(3974832..3975725)
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AA seq
297 aa
AA seq
DB search
MPKPPPPPPGLVVVDKDRGPTSHDVVGKLRRIMGTRKVGHAGTLDPMATGVLVVGIERAT
KLLGHLSLDTKAYTATVRLGQATDTDDAEGTPVGDPVTVTAGEPEVRGAMAALTGDIEQV
PSAVSAVKIDGKRAYQRVRDGETVEIPARPVTVSAFDLRDLRRDGGFVDLDVVVECTSGT
YVRALARDLGVALGAGGHLTALRRTRVGPFTLEHARTVEQLAAEPGLSLDLAAAVATAFP
RVDVDDAAATDVRIGRSLPSAGIPGTYGVFGPDGAALALMADRGPSARPVVVLAPAG
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaagccaccgcctccgccgcccggtctcgtcgtcgtcgacaaggaccggggtccg
accagccacgacgtcgtcgggaagctgcgccggatcatgggcacccgcaaggtcggccac
gccgggacgctcgacccgatggcgaccggcgtgctggtcgtcggcatcgagcgggcgacg
aagctgctggggcacctgtcgctggacaccaaggcctacaccgcgaccgtccggctcggg
caggcgaccgacaccgacgacgccgagggcacgcccgtcggtgaccccgtcacggtcacg
gcgggcgagccggaggtccggggcgcgatggcggcgctgaccggggacatcgagcaggtc
ccgagcgcggtgtccgcggtgaagatcgacgggaagcgcgcctaccagcgcgtccgcgac
ggcgagacggtcgagatcccggcccggccggtcacggtgtcggcgttcgacctgcgcgac
ctgcgccgggacggcgggttcgtggacctcgacgtcgtcgtggagtgcacgtcggggacc
tacgtgcgggcgctggcccgcgatctcggggtggcgctcggcgcgggcgggcacctcacg
gcgctgcgccgcacccgggtcgggcccttcaccctggagcacgcccgcaccgtcgagcag
ctggccgccgagccgggcctctcgctcgacctggccgcggcggtggcgacggcgttcccg
cgggtcgacgtcgacgacgcggccgccaccgacgtgcggatcggccggtcgctgccgtcc
gcggggatccccggcacgtacggcgtgttcgggcccgacggggccgcgctcgcgctgatg
gccgaccgcggaccgtccgcgcgcccggtggtcgtgctggccccggccggctga
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